Gene
RNA
| Item | Value |
|---|---|
| gene id | G1947313 |
| gene name | LOC106581772 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 8598497 ~ 8598769 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2227174 | True | 273 | TUCP | 0.53 | 1 | 8598497 | 8598769 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| colec11 | colec11 | coding | upstream | 6823 | 8584777 ~ 8591674 (+) |
| impg1b | LOC106610691 | coding | upstream | 122865 | 8443499 ~ 8475632 (+) |
| LOC110505309 | LOC106610707 | coding | upstream | 198046 | 8398339 ~ 8400451 (+) |
| LOC110505307 | LOC106610690 | coding | upstream | 229372 | 8341945 ~ 8369125 (+) |
| LOC110505306 | LOC100286553 | coding | upstream | 256981 | 8332426 ~ 8341516 (+) |
| LOC118944359 | LOC106610709 | coding | downstream | 165173 | 8763942 ~ 8769241 (+) |
| LOC118944136 | NA | coding | downstream | 401116 | 8999885 ~ 9018674 (+) |
| sox11a | LOC106610697 | coding | downstream | 522243 | 9121012 ~ 9123841 (+) |
| LOC110504183 | vig1 | coding | downstream | 990685 | 9589454 ~ 9591033 (+) |
| vig1 | vig1 | coding | downstream | 997480 | 9596249 ~ 9601630 (+) |
| G1947066 | NA | non-coding | upstream | 3536 | 8594538 ~ 8594961 (+) |
| G1946861 | NA | non-coding | upstream | 321925 | 8276188 ~ 8276572 (+) |
| G1946851 | NA | non-coding | upstream | 338434 | 8259893 ~ 8260063 (+) |
| G1946720 | NA | non-coding | upstream | 469810 | 8128404 ~ 8128687 (+) |
| G1947337 | NA | non-coding | downstream | 15285 | 8614054 ~ 8614337 (+) |
| G1947496 | LOC106582599 | non-coding | downstream | 133177 | 8731946 ~ 8732456 (+) |
| G1947532 | NA | non-coding | downstream | 159248 | 8758017 ~ 8758618 (+) |
| G1947560 | NA | non-coding | downstream | 181191 | 8779960 ~ 8780262 (+) |
| LOC110505296 | LOC106610680 | other | upstream | 559094 | 8029930 ~ 8116516 (+) |
| G1946485 | NA | other | upstream | 579207 | 8018438 ~ 8019290 (+) |
| LOC110505283 | LOC106610673 | other | upstream | 1001374 | 7523775 ~ 7605647 (+) |
| G1945166 | NA | other | upstream | 1647235 | 6944211 ~ 6951262 (+) |
| G1944456 | LOC106598199 | other | upstream | 2131374 | 6465789 ~ 6467123 (+) |
| asap2a | LOC106566627 | other | downstream | 1733955 | 10246155 ~ 10341934 (+) |
| G1949041 | LOC106610723 | other | downstream | 1758844 | 10357613 ~ 10361156 (+) |
| G1949170 | NA | other | downstream | 1772884 | 10371653 ~ 10372689 (+) |
| G1949039 | 1433b | other | downstream | 1788002 | 10386771 ~ 10462100 (+) |
| LOC110505330 | LOC106610717 | other | downstream | 2214459 | 10809234 ~ 10814564 (+) |
