Gene
RNA
| Item | Value |
|---|---|
| gene id | G1949484 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 10147806 ~ 10163760 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2229464 | True | 336 | lncRNA | 0.45 | 2 | 10147806 | 10163760 |
10,130,000
10,132,000
10,134,000
10,136,000
10,138,000
10,140,000
10,142,000
10,144,000
10,146,000
10,148,000
10,150,000
10,152,000
10,154,000
10,156,000
10,158,000
10,160,000
10,162,000
10,164,000
NC_048589.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505318 | NA | coding | downstream | 68587 | 10073902 ~ 10079219 (-) |
| kidins220a | LOC106610701 | coding | downstream | 74610 | 9969792 ~ 10073196 (-) |
| cmpk2 | cmpk2 | coding | downstream | 559950 | 9575380 ~ 9587856 (-) |
| LOC110505312 | LOC106610694 | coding | downstream | 1564808 | 8576560 ~ 8582998 (-) |
| LOC110505310 | LOC106610693 | coding | downstream | 1572947 | 8475934 ~ 8574859 (-) |
| itgb1bp1 | itgb1bp1 | coding | upstream | 177763 | 10341523 ~ 10354208 (-) |
| adam17a | LOC106610723 | coding | upstream | 195855 | 10359615 ~ 10383848 (-) |
| LOC100136195 | LOC100136195 | coding | upstream | 223011 | 10386771 ~ 10398050 (-) |
| LOC110505327 | LOC106610719 | coding | upstream | 416114 | 10579874 ~ 10607038 (-) |
| LOC110504315 | NA | coding | upstream | 490926 | 10654686 ~ 10665355 (-) |
| G1949462 | NA | non-coding | downstream | 61000 | 10086360 ~ 10086806 (-) |
| G1949406 | NA | non-coding | downstream | 161450 | 9979698 ~ 9986356 (-) |
| G1949401 | NA | non-coding | downstream | 181673 | 9965711 ~ 9966133 (-) |
| G1949398 | NA | non-coding | downstream | 185118 | 9962414 ~ 9962688 (-) |
| G1949450 | NA | non-coding | upstream | 7419 | 10171179 ~ 10176067 (-) |
| G1949587 | asap2 | non-coding | upstream | 152906 | 10316666 ~ 10326016 (-) |
| G1949594 | NA | non-coding | upstream | 166707 | 10330467 ~ 10331732 (-) |
| G1949544 | NA | non-coding | upstream | 193155 | 10356915 ~ 10413720 (-) |
| G1949611 | NA | non-coding | upstream | 237023 | 10400783 ~ 10401683 (-) |
| G1949387 | NA | other | downstream | 198446 | 9948906 ~ 9949360 (-) |
| G1945534 | NA | other | downstream | 3225442 | 6921985 ~ 6922364 (-) |
| G1945526 | LOC100136012 | other | downstream | 3232579 | 6914595 ~ 6915227 (-) |
| G1945488 | NA | other | downstream | 3283162 | 6863805 ~ 6864644 (-) |
| fancm | fancm | other | downstream | 4369037 | 5765698 ~ 5833986 (-) |
| G1950222 | LOC106610714 | other | upstream | 587359 | 10751119 ~ 10752009 (-) |
| LOC110505329 | LOC106610716 | other | upstream | 612824 | 10769777 ~ 10799354 (-) |
| G1950292 | NA | other | upstream | 721103 | 10884863 ~ 10885108 (-) |
| LOC118944219 | vps4a | other | upstream | 1233308 | 11397068 ~ 11481374 (-) |
| LOC110505340 | LOC106588272 | other | upstream | 1243578 | 11394818 ~ 11410200 (-) |
