Gene
RNA
| Item | Value |
|---|---|
| gene id | G1950849 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 11751182 ~ 11770930 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2230989 | False | 386 | lncRNA | 0.44 | 4 | 11751182 | 11770930 |
| TU2230992 | False | 486 | lncRNA | 0.43 | 3 | 11760073 | 11763767 |
| TU2230991 | True | 223 | lncRNA | 0.43 | 2 | 11760880 | 11763767 |
11,736,000
11,740,000
11,744,000
11,748,000
11,752,000
11,756,000
11,756,000
11,760,000
11,764,000
11,768,000
11,772,000
11,776,000
NC_048589.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kif28 | kif28p | coding | upstream | 199347 | 11536098 ~ 11551835 (+) |
| LOC110505350 | LOC106610733 | coding | upstream | 218482 | 11503450 ~ 11532700 (+) |
| LOC110505337 | scpdh | coding | upstream | 455802 | 11267373 ~ 11295380 (+) |
| LOC110505332 | LOC106610711 | coding | upstream | 738430 | 10844977 ~ 11012752 (+) |
| LOC110505330 | LOC106610717 | coding | upstream | 936642 | 10809234 ~ 10814564 (+) |
| LOC110505357 | NA | coding | downstream | 185316 | 11956246 ~ 11959538 (+) |
| esrrga | LOC106570958 | coding | downstream | 363980 | 12134910 ~ 12240158 (+) |
| LOC110505364 | LOC106610747 | coding | downstream | 868752 | 12639682 ~ 12647343 (+) |
| LOC110505366 | LOC106610818 | coding | downstream | 879995 | 12650925 ~ 12662628 (+) |
| LOC110504192 | LOC106610748 | coding | downstream | 894093 | 12665023 ~ 12701326 (+) |
| G1950855 | NA | non-coding | upstream | 9803 | 11714445 ~ 11741379 (+) |
| G1950857 | NA | non-coding | upstream | 22033 | 11728233 ~ 11729149 (+) |
| G1950825 | NA | non-coding | upstream | 66869 | 11683828 ~ 11684313 (+) |
| G1950674 | NA | non-coding | upstream | 128013 | 11620635 ~ 11623169 (+) |
| G1950675 | NA | non-coding | upstream | 129831 | 11620011 ~ 11621351 (+) |
| G1950897 | NA | non-coding | downstream | 12192 | 11783122 ~ 11785159 (+) |
| G1950910 | NA | non-coding | downstream | 39624 | 11810554 ~ 11810763 (+) |
| G1950914 | NA | non-coding | downstream | 56655 | 11827585 ~ 11827865 (+) |
| G1950915 | NA | non-coding | downstream | 58712 | 11829642 ~ 11829943 (+) |
| G1950918 | NA | non-coding | downstream | 65696 | 11836626 ~ 11836840 (+) |
| G1950642 | LOC106610734 | other | upstream | 193274 | 11554525 ~ 11557908 (+) |
| G1949039 | 1433b | other | upstream | 1362469 | 10386771 ~ 10462100 (+) |
| G1949170 | NA | other | upstream | 1378493 | 10371653 ~ 10372689 (+) |
| G1949041 | LOC106610723 | other | upstream | 1390026 | 10357613 ~ 10361156 (+) |
| LOC118944376 | NA | other | downstream | 1316806 | 13087702 ~ 13089271 (+) |
| LOC110505390 | LOC106610772 | other | downstream | 2077668 | 13848535 ~ 13860898 (+) |
| G1953696 | NA | other | downstream | 2582895 | 14353825 ~ 14354124 (+) |
| tfb1m | LOC106610789 | other | downstream | 3210847 | 14947569 ~ 14994632 (+) |
| G1954503 | NA | other | downstream | 3267216 | 15038146 ~ 15039536 (+) |
