G1951040


Basic Information

Item Value
gene id G1951040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 11928646 ~ 11928900 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2231225
ttatcgaacaaaacatacatgtattgtgtaacatgaagtcctatgagtgtcatctgatgaagatcatcaaaggttagtgattcattttatctctatttctgctttttgtgactcctctcgttggctggaaaaatggctgtgtttttctgtgactaggtactgacctaacataatcgtttggtgtgctttcgtcgtaaagcctttttgaaatcggacactgtggctggatttacaacaagtttatctttaaaatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2231225 True 255 lncRNA 0.37 1 11928646 11928900

Neighbor

gene id symbol gene type direction distance location
kif28 kif28p coding upstream 376811 11536098 ~ 11551835 (+)
LOC110505350 LOC106610733 coding upstream 395946 11503450 ~ 11532700 (+)
LOC110505337 scpdh coding upstream 633266 11267373 ~ 11295380 (+)
LOC110505332 LOC106610711 coding upstream 915894 10844977 ~ 11012752 (+)
LOC110505330 LOC106610717 coding upstream 1114106 10809234 ~ 10814564 (+)
LOC110505357 NA coding downstream 27346 11956246 ~ 11959538 (+)
esrrga LOC106570958 coding downstream 206010 12134910 ~ 12240158 (+)
LOC110505364 LOC106610747 coding downstream 710782 12639682 ~ 12647343 (+)
LOC110505366 LOC106610818 coding downstream 722025 12650925 ~ 12662628 (+)
LOC110504192 LOC106610748 coding downstream 736123 12665023 ~ 12701326 (+)
G1951033 NA non-coding upstream 5447 11922905 ~ 11923199 (+)
G1950922 NA non-coding upstream 80034 11848292 ~ 11848612 (+)
G1950920 NA non-coding upstream 86836 11840771 ~ 11841810 (+)
G1950918 NA non-coding upstream 91806 11836626 ~ 11836840 (+)
G1950915 NA non-coding upstream 98703 11829642 ~ 11829943 (+)
G1951099 NA non-coding downstream 118074 12046974 ~ 12047197 (+)
G1951102 NA non-coding downstream 121794 12050694 ~ 12051028 (+)
G1951174 NA non-coding downstream 259756 12188656 ~ 12189249 (+)
G1951340 NA non-coding downstream 336291 12265191 ~ 12265456 (+)
G1951343 NA non-coding downstream 338831 12267731 ~ 12268490 (+)
G1950642 LOC106610734 other upstream 370738 11554525 ~ 11557908 (+)
G1949039 1433b other upstream 1539933 10386771 ~ 10462100 (+)
G1949170 NA other upstream 1555957 10371653 ~ 10372689 (+)
G1949041 LOC106610723 other upstream 1567490 10357613 ~ 10361156 (+)
LOC118944376 NA other downstream 1158836 13087702 ~ 13089271 (+)
LOC110505390 LOC106610772 other downstream 1919698 13848535 ~ 13860898 (+)
G1953696 NA other downstream 2424925 14353825 ~ 14354124 (+)
tfb1m LOC106610789 other downstream 3052877 14947569 ~ 14994632 (+)
G1954503 NA other downstream 3109246 15038146 ~ 15039536 (+)

Expression


Co-expression Network