Gene
RNA
| Item | Value |
|---|---|
| gene id | G1951340 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 12265191 ~ 12265456 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2231543 | True | 266 | lncRNA | 0.42 | 1 | 12265191 | 12265456 |
12,262,400
12,262,800
12,263,200
12,263,600
12,264,000
12,264,400
12,264,400
12,264,800
12,265,200
12,265,600
12,266,000
12,266,400
NC_048589.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| esrrga | LOC106570958 | coding | upstream | 25033 | 12134910 ~ 12240158 (+) |
| LOC110505357 | NA | coding | upstream | 305653 | 11956246 ~ 11959538 (+) |
| kif28 | kif28p | coding | upstream | 713356 | 11536098 ~ 11551835 (+) |
| LOC110505350 | LOC106610733 | coding | upstream | 732491 | 11503450 ~ 11532700 (+) |
| LOC110505337 | scpdh | coding | upstream | 969811 | 11267373 ~ 11295380 (+) |
| LOC110505364 | LOC106610747 | coding | downstream | 374226 | 12639682 ~ 12647343 (+) |
| LOC110505366 | LOC106610818 | coding | downstream | 385469 | 12650925 ~ 12662628 (+) |
| LOC110504192 | LOC106610748 | coding | downstream | 399567 | 12665023 ~ 12701326 (+) |
| LOC110505362 | LOC106610749 | coding | downstream | 436606 | 12702062 ~ 12718303 (+) |
| rpap1 | rpap1 | coding | downstream | 490793 | 12756249 ~ 12768426 (+) |
| G1951174 | NA | non-coding | upstream | 75942 | 12188656 ~ 12189249 (+) |
| G1951102 | NA | non-coding | upstream | 214163 | 12050694 ~ 12051028 (+) |
| G1951099 | NA | non-coding | upstream | 217994 | 12046974 ~ 12047197 (+) |
| G1951040 | NA | non-coding | upstream | 336291 | 11928646 ~ 11928900 (+) |
| G1951033 | NA | non-coding | upstream | 341992 | 11922905 ~ 11923199 (+) |
| G1951343 | NA | non-coding | downstream | 2275 | 12267731 ~ 12268490 (+) |
| G1951345 | NA | non-coding | downstream | 5016 | 12270472 ~ 12270792 (+) |
| G1951347 | NA | non-coding | downstream | 7435 | 12272891 ~ 12273274 (+) |
| G1951349 | NA | non-coding | downstream | 12687 | 12278143 ~ 12282152 (+) |
| G1951354 | NA | non-coding | downstream | 22756 | 12288212 ~ 12288824 (+) |
| G1950642 | LOC106610734 | other | upstream | 707283 | 11554525 ~ 11557908 (+) |
| LOC110505330 | LOC106610717 | other | upstream | 1450627 | 10809234 ~ 10814564 (+) |
| G1949039 | 1433b | other | upstream | 1876478 | 10386771 ~ 10462100 (+) |
| G1949170 | NA | other | upstream | 1892502 | 10371653 ~ 10372689 (+) |
| G1949041 | LOC106610723 | other | upstream | 1904035 | 10357613 ~ 10361156 (+) |
| LOC118944376 | NA | other | downstream | 822280 | 13087702 ~ 13089271 (+) |
| LOC110505390 | LOC106610772 | other | downstream | 1583142 | 13848535 ~ 13860898 (+) |
| G1953696 | NA | other | downstream | 2088369 | 14353825 ~ 14354124 (+) |
| tfb1m | LOC106610789 | other | downstream | 2716321 | 14947569 ~ 14994632 (+) |
| G1954503 | NA | other | downstream | 2772690 | 15038146 ~ 15039536 (+) |
