G1951354


Basic Information

Item Value
gene id G1951354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 12288212 ~ 12288824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2231564
gtagagagagagtcgattttcatggagaacaaaggaaatccttccacctcacagaacttgaggtatgaacaaatttcatgttccggagacagtataaaagatcggtgaagaatacAGCTACGAACTGGTTCGTTTGTCACAACTtagggaagctcatgggagacggagTGGCCACATTACaaataacgctgtttatataatagcctcagatatgaggtttacatctaattgttgtataagatgaatgagtgagtatgatactgtttgtataattgtgtaatatgattttggactgtttaatgaagaaaaatacaattcccttttgattttaactaaatcagagaaccgcccctgagcccagttagggtcagacatcctggggcAGCCCTCTTCGgcccttccgaataaaacccccactcgggttttcgatcagcagaccgagcttacctcaattacgagatggctaaaggttgcagaccatgtttttctccattaggagagtacaaaggttgtagaccattgctgaatcttttaaccataccacgtggttaaactcttagactatcgataccgactaagaataagaacaagtctttgatattaattactagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2231564 True 613 lncRNA 0.40 1 12288212 12288824
Loading

Neighbor

gene id symbol gene type direction distance location
esrrga LOC106570958 coding upstream 48054 12134910 ~ 12240158 (+)
LOC110505357 NA coding upstream 328674 11956246 ~ 11959538 (+)
kif28 kif28p coding upstream 736377 11536098 ~ 11551835 (+)
LOC110505350 LOC106610733 coding upstream 755512 11503450 ~ 11532700 (+)
LOC110505337 scpdh coding upstream 992832 11267373 ~ 11295380 (+)
LOC110505364 LOC106610747 coding downstream 350858 12639682 ~ 12647343 (+)
LOC110505366 LOC106610818 coding downstream 362101 12650925 ~ 12662628 (+)
LOC110504192 LOC106610748 coding downstream 376199 12665023 ~ 12701326 (+)
LOC110505362 LOC106610749 coding downstream 413238 12702062 ~ 12718303 (+)
rpap1 rpap1 coding downstream 467425 12756249 ~ 12768426 (+)
G1951349 NA non-coding upstream 6060 12278143 ~ 12282152 (+)
G1951347 NA non-coding upstream 14938 12272891 ~ 12273274 (+)
G1951345 NA non-coding upstream 17420 12270472 ~ 12270792 (+)
G1951343 NA non-coding upstream 19722 12267731 ~ 12268490 (+)
G1951340 NA non-coding upstream 22756 12265191 ~ 12265456 (+)
G1951367 NA non-coding downstream 12805 12301629 ~ 12302151 (+)
G1951387 NA non-coding downstream 49446 12338270 ~ 12338515 (+)
G1951457 NA non-coding downstream 98608 12387432 ~ 12387638 (+)
G1951465 NA non-coding downstream 103345 12392169 ~ 12392423 (+)
G1951469 NA non-coding downstream 106905 12395729 ~ 12396064 (+)
G1950642 LOC106610734 other upstream 730304 11554525 ~ 11557908 (+)
LOC110505330 LOC106610717 other upstream 1473648 10809234 ~ 10814564 (+)
G1949039 1433b other upstream 1899499 10386771 ~ 10462100 (+)
G1949170 NA other upstream 1915523 10371653 ~ 10372689 (+)
G1949041 LOC106610723 other upstream 1927056 10357613 ~ 10361156 (+)
LOC118944376 NA other downstream 798912 13087702 ~ 13089271 (+)
LOC110505390 LOC106610772 other downstream 1559774 13848535 ~ 13860898 (+)
G1953696 NA other downstream 2065001 14353825 ~ 14354124 (+)
tfb1m LOC106610789 other downstream 2692953 14947569 ~ 14994632 (+)
G1954503 NA other downstream 2749322 15038146 ~ 15039536 (+)

Expression

G1951354 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G1951354 Expression in each Bioproject

Bar chart with 20 bars.
G1951354 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network