G1959632


Basic Information

Item Value
gene id G1959632
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 19385737 ~ 19395564 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2240696
GTATTTGGGGACAGACCCCTGTGGCTTTCTCTTGAGGGCAAAGTGGGATTAGGGGACCCCCCTCCTCTTGGACCCCTGCCAAGGCTTAATGGAGATACACACAAGCTCGGGTGACCCCCAAATCAACACTTGGACTTTACTTAAACTGGGCCAACAAACAAGGAGGAATCATACTCTAGTGTGTGGGATTTACTATGAATAATTTCTGCCATCTCTGCTATTACTGGCGACATGTGAAGAATtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagaatgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagttgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccaaaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaatggaactttttggcaacaatgcaaaatgttatgtttggcgtaaaagcaacacagctcatcaccctgaacac

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2240696 True 728 TUCP 0.45 3 19385737 19395564

Neighbor

gene id symbol gene type direction distance location
LOC110505522 LOC106611101 coding downstream 3138 19378085 ~ 19382599 (-)
LOC110504202 LOC106588908 coding downstream 6176 19366672 ~ 19379561 (-)
LOC110505521 dpf3 coding downstream 27432 19311355 ~ 19358305 (-)
LOC118944210 ef-1g coding downstream 275803 19109626 ~ 19109934 (-)
LOC110505515 ef-1g coding downstream 275809 19108423 ~ 19109928 (-)
LOC110504326 LOC106611099 coding upstream 11544 19407108 ~ 19409111 (-)
LOC110505524 LOC106611070 coding upstream 16463 19412027 ~ 19421296 (-)
exd1 LOC106611069 coding upstream 67196 19459418 ~ 19472995 (-)
LOC110505529 LOC106611064 coding upstream 204670 19600234 ~ 19607431 (-)
LOC100136175 LOC106611063 coding upstream 216545 19612109 ~ 19632795 (-)
G1959599 NA non-coding downstream 81899 19301048 ~ 19303838 (-)
G1959600 NA non-coding downstream 83178 19299161 ~ 19302559 (-)
G1959379 NA non-coding downstream 135997 19249486 ~ 19249740 (-)
G1959378 NA non-coding downstream 138274 19247081 ~ 19247463 (-)
G1959366 NA non-coding downstream 149958 19228496 ~ 19235779 (-)
G1959700 LOC106611065 non-coding upstream 116752 19512316 ~ 19512574 (-)
G1959701 NA non-coding upstream 118784 19514348 ~ 19515071 (-)
G1959727 NA non-coding upstream 131926 19527490 ~ 19527705 (-)
G1959733 NA non-coding upstream 133753 19529317 ~ 19529740 (-)
LOC110505513 LOC106578354 other downstream 301974 19078852 ~ 19092504 (-)
LOC110505506 LOC108430664 other downstream 618215 18763775 ~ 18767607 (-)
LOC110505483 LOC106610862 other downstream 1675096 17698417 ~ 17710695 (-)
LOC110505478 NA other downstream 1772866 17609161 ~ 17612920 (-)
LOC110505445 fndc5 other downstream 2651507 16727548 ~ 16749731 (-)
G1959757 NA other upstream 148866 19544430 ~ 19544883 (-)
LOC110505546 LOC106611046 other upstream 948778 20326197 ~ 20357077 (-)
G1961046 NA other upstream 953228 20348792 ~ 20413709 (-)

Expression


Co-expression Network