G1960181


Basic Information

Item Value
gene id G1960181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 19799744 ~ 19807916 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2241320
cactctaaccactaggctatcctgctgccccagtctgaggtcctgagtgctctggagcaggttttcatcaaggatctctctgtactttgctccgttcatctttgcatcgatcctgactagtctccctgtcactgaaaaacatcctcaaaggcctcccgggtggcgcagtggttaagggcgctgtactgcagtgccagctgtgtcatcagagactctgggttcgcgcccaggctctgtcgtaaccggccgtgaccgggaggtccgtggggcgacgcacaattggcctagcgtcgtccgggttagggagggcttggccggtagggatgtccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcgcgctaaccaaggttgccaggtgcacggtgtttcctccgacacattggtgcggctggcttccgggttggatgcgtgctgtgttaagaagcagtgcggcttggttgggttgtgtatcggaggacgcatgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2241320 True 507 lncRNA 0.60 2 19799744 19807916

Neighbor

gene id symbol gene type direction distance location
LOC110505531 LOC106611061 coding downstream 6744 19647103 ~ 19793000 (-)
pomt2 pomt2 coding downstream 157737 19633477 ~ 19642007 (-)
LOC100136175 LOC106611063 coding downstream 166949 19612109 ~ 19632795 (-)
LOC110505529 LOC106611064 coding downstream 192313 19600234 ~ 19607431 (-)
exd1 LOC106611069 coding downstream 326749 19459418 ~ 19472995 (-)
LOC110505533 LOC106611059 coding upstream 19993 19827909 ~ 19862881 (-)
angel1 LOC106611057 coding upstream 75552 19883468 ~ 19892721 (-)
LOC110505539 dlst coding upstream 109678 19917594 ~ 19926699 (-)
LOC110505541 LOC106611051 coding upstream 175307 19983223 ~ 20048442 (-)
LOC110505542 gpatch2l coding upstream 293842 20101758 ~ 20141822 (-)
G1960177 NA non-coding downstream 3656 19795766 ~ 19796088 (-)
G1960162 NA non-coding downstream 21103 19778441 ~ 19778641 (-)
G1960145 NA non-coding downstream 48898 19750593 ~ 19750846 (-)
G1960139 NA non-coding downstream 55185 19744269 ~ 19744559 (-)
G1960130 NA non-coding downstream 79946 19719180 ~ 19719798 (-)
G1960205 NA non-coding upstream 26970 19834886 ~ 19910497 (-)
G1960242 NA non-coding upstream 119632 19927548 ~ 19927801 (-)
G1960270 NA non-coding upstream 169549 19977465 ~ 19977672 (-)
G1960604 tgfb3 non-coding upstream 402288 20210204 ~ 20219857 (-)
G1960671 NA non-coding upstream 500641 20308557 ~ 20308871 (-)
G1959757 NA other downstream 254861 19544430 ~ 19544883 (-)
LOC110505524 LOC106611070 other downstream 381895 19412027 ~ 19421296 (-)
G1959632 NA other downstream 404180 19385737 ~ 19395564 (-)
LOC110505513 LOC106578354 other downstream 715981 19078852 ~ 19092504 (-)
LOC110505546 LOC106611046 other upstream 536426 20326197 ~ 20357077 (-)
G1961046 NA other upstream 540876 20348792 ~ 20413709 (-)
acyp1 acyp1 other upstream 598486 20406401 ~ 20407806 (-)
G1961081 NA other upstream 605888 20413804 ~ 20414118 (-)
LOC110505560 LOC106611035 other upstream 698309 20506225 ~ 20510972 (-)

Expression


Co-expression Network