Gene
RNA
| Item | Value |
|---|---|
| gene id | G1960270 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 19977465 ~ 19977672 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2241411 | True | 208 | lncRNA | 0.38 | 1 | 19977465 | 19977672 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505539 | dlst | coding | downstream | 50766 | 19917594 ~ 19926699 (-) |
| angel1 | LOC106611057 | coding | downstream | 84744 | 19883468 ~ 19892721 (-) |
| LOC110505533 | LOC106611059 | coding | downstream | 114584 | 19827909 ~ 19862881 (-) |
| LOC110505531 | LOC106611061 | coding | downstream | 184465 | 19647103 ~ 19793000 (-) |
| pomt2 | pomt2 | coding | downstream | 335458 | 19633477 ~ 19642007 (-) |
| LOC110505541 | LOC106611051 | coding | upstream | 5551 | 19983223 ~ 20048442 (-) |
| LOC110505542 | gpatch2l | coding | upstream | 124086 | 20101758 ~ 20141822 (-) |
| LOC110505544 | ift43 | coding | upstream | 187496 | 20165168 ~ 20198478 (-) |
| LOC110505546 | LOC106611046 | coding | upstream | 348525 | 20326197 ~ 20357077 (-) |
| jdp2a | LOC106611045 | coding | upstream | 388308 | 20365980 ~ 20383084 (-) |
| G1960242 | NA | non-coding | downstream | 49664 | 19927548 ~ 19927801 (-) |
| G1960205 | NA | non-coding | downstream | 66968 | 19834886 ~ 19910497 (-) |
| G1960181 | NA | non-coding | downstream | 169549 | 19799744 ~ 19807916 (-) |
| G1960177 | NA | non-coding | downstream | 181377 | 19795766 ~ 19796088 (-) |
| G1960162 | NA | non-coding | downstream | 198824 | 19778441 ~ 19778641 (-) |
| G1960604 | tgfb3 | non-coding | upstream | 232532 | 20210204 ~ 20219857 (-) |
| G1960671 | NA | non-coding | upstream | 330885 | 20308557 ~ 20308871 (-) |
| G1960681 | NA | non-coding | upstream | 335399 | 20313071 ~ 20313278 (-) |
| G1960685 | NA | non-coding | upstream | 338894 | 20316566 ~ 20316805 (-) |
| G1960694 | NA | non-coding | upstream | 346112 | 20323784 ~ 20324052 (-) |
| G1959757 | NA | other | downstream | 432582 | 19544430 ~ 19544883 (-) |
| exd1 | LOC106611069 | other | downstream | 514404 | 19459418 ~ 19472995 (-) |
| LOC110505524 | LOC106611070 | other | downstream | 559616 | 19412027 ~ 19421296 (-) |
| G1959632 | NA | other | downstream | 581901 | 19385737 ~ 19395564 (-) |
| LOC110505513 | LOC106578354 | other | downstream | 893702 | 19078852 ~ 19092504 (-) |
| G1961046 | NA | other | upstream | 371120 | 20348792 ~ 20413709 (-) |
| acyp1 | acyp1 | other | upstream | 428730 | 20406401 ~ 20407806 (-) |
| G1961081 | NA | other | upstream | 436132 | 20413804 ~ 20414118 (-) |
| LOC110505560 | LOC106611035 | other | upstream | 528553 | 20506225 ~ 20510972 (-) |
