Gene
RNA
| Item | Value |
|---|---|
| gene id | G1960685 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 20316566 ~ 20316805 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tubulin polyglutamylase TTLL5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2241855 | True | 240 | lncRNA | 0.44 | 1 | 20316566 | 20316805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505544 | ift43 | coding | downstream | 118088 | 20165168 ~ 20198478 (-) |
| LOC110505542 | gpatch2l | coding | downstream | 174744 | 20101758 ~ 20141822 (-) |
| LOC110505541 | LOC106611051 | coding | downstream | 268124 | 19983223 ~ 20048442 (-) |
| LOC110505539 | dlst | coding | downstream | 389867 | 19917594 ~ 19926699 (-) |
| angel1 | LOC106611057 | coding | downstream | 423845 | 19883468 ~ 19892721 (-) |
| LOC110505546 | LOC106611046 | coding | upstream | 9392 | 20326197 ~ 20357077 (-) |
| jdp2a | LOC106611045 | coding | upstream | 49175 | 20365980 ~ 20383084 (-) |
| fosaa | LOC106611096 | coding | upstream | 66695 | 20383500 ~ 20387373 (-) |
| mlh3 | mlh3 | coding | upstream | 83207 | 20400012 ~ 20406260 (-) |
| acyp1 | acyp1 | coding | upstream | 89596 | 20406401 ~ 20407806 (-) |
| G1960681 | NA | non-coding | downstream | 3288 | 20313071 ~ 20313278 (-) |
| G1960671 | NA | non-coding | downstream | 7695 | 20308557 ~ 20308871 (-) |
| G1960604 | tgfb3 | non-coding | downstream | 96709 | 20210204 ~ 20219857 (-) |
| G1960270 | NA | non-coding | downstream | 338894 | 19977465 ~ 19977672 (-) |
| G1960242 | NA | non-coding | downstream | 388765 | 19927548 ~ 19927801 (-) |
| G1960694 | NA | non-coding | upstream | 6979 | 20323784 ~ 20324052 (-) |
| G1961035 | NA | non-coding | upstream | 13033 | 20329838 ~ 20330062 (-) |
| G1961037 | NA | non-coding | upstream | 14643 | 20331448 ~ 20331716 (-) |
| G1961054 | LOC106611039 | non-coding | upstream | 109022 | 20425827 ~ 20427781 (-) |
| G1959757 | NA | other | downstream | 771683 | 19544430 ~ 19544883 (-) |
| exd1 | LOC106611069 | other | downstream | 853505 | 19459418 ~ 19472995 (-) |
| LOC110505524 | LOC106611070 | other | downstream | 898717 | 19412027 ~ 19421296 (-) |
| G1959632 | NA | other | downstream | 921002 | 19385737 ~ 19395564 (-) |
| LOC110505513 | LOC106578354 | other | downstream | 1232803 | 19078852 ~ 19092504 (-) |
| G1961046 | NA | other | upstream | 31987 | 20348792 ~ 20413709 (-) |
| G1961081 | NA | other | upstream | 96999 | 20413804 ~ 20414118 (-) |
| LOC110505560 | LOC106611035 | other | upstream | 189420 | 20506225 ~ 20510972 (-) |
