Gene
RNA
| Item | Value |
|---|---|
| gene id | G1960753 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 20417312 ~ 20417521 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2241932 | True | 210 | lncRNA | 0.42 | 1 | 20417312 | 20417521 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zc2hc1c | zc2hc1c | coding | upstream | 6451 | 20407861 ~ 20410861 (+) |
| tmeda | tmeda | coding | upstream | 16964 | 20387433 ~ 20400348 (+) |
| LOC110505545 | tgfb3 | coding | upstream | 193034 | 20210196 ~ 20224278 (+) |
| LOC110505540 | prox2 | coding | upstream | 473870 | 19926648 ~ 19943442 (+) |
| LOC110505538 | LOC106611054 | coding | upstream | 499705 | 19908000 ~ 19917607 (+) |
| LOC110505558 | LOC106611039 | coding | downstream | 8323 | 20425844 ~ 20427892 (+) |
| LOC110505557 | LOC106611038 | coding | downstream | 10469 | 20427990 ~ 20430387 (+) |
| LOC118944247 | LOC106611040 | coding | downstream | 15100 | 20432621 ~ 20434988 (+) |
| LOC110505559 | LOC106611036 | coding | downstream | 23698 | 20441219 ~ 20500439 (+) |
| LOC110505561 | LOC106611034 | coding | downstream | 105544 | 20523065 ~ 20542189 (+) |
| G1960700 | NA | non-coding | upstream | 82468 | 20334558 ~ 20334844 (+) |
| G1960699 | NA | non-coding | upstream | 82929 | 20334179 ~ 20334383 (+) |
| G1960693 | NA | non-coding | upstream | 92959 | 20323643 ~ 20324353 (+) |
| G1960689 | NA | non-coding | upstream | 97444 | 20319640 ~ 20319868 (+) |
| G1960438 | NA | non-coding | upstream | 180706 | 20185571 ~ 20236606 (+) |
| G1960755 | NA | non-coding | downstream | 789 | 20418310 ~ 20418678 (+) |
| G1960761 | NA | non-coding | downstream | 6923 | 20424444 ~ 20424677 (+) |
| G1960762 | NA | non-coding | downstream | 7415 | 20424936 ~ 20425240 (+) |
| G1960776 | NA | non-coding | downstream | 26723 | 20444244 ~ 20447906 (+) |
| G1960805 | NA | non-coding | downstream | 124753 | 20542274 ~ 20544850 (+) |
| LOC110505516 | LOC106611074 | other | upstream | 1267112 | 19132397 ~ 19150399 (+) |
| G1959241 | LOC106613263 | other | upstream | 1268956 | 19147948 ~ 19148356 (+) |
| G1957752 | LOC106610850 | other | upstream | 2463824 | 17948648 ~ 17953488 (+) |
| LOC110505477 | LOC106610865 | other | upstream | 2789281 | 17611871 ~ 17628031 (+) |
| LOC110504198 | mthfd1 | other | upstream | 3051718 | 17349032 ~ 17366266 (+) |
| G1960756 | NA | other | downstream | 1473 | 20418994 ~ 20419306 (+) |
| G1960851 | NA | other | downstream | 216618 | 20634139 ~ 20635612 (+) |
| G1960977 | NA | other | downstream | 404796 | 20822317 ~ 20822638 (+) |
| G1961468 | NA | other | downstream | 621684 | 21039205 ~ 21039800 (+) |
| G1961492 | NA | other | downstream | 650443 | 21067964 ~ 21068669 (+) |
