G1960977


Basic Information

Item Value
gene id G1960977
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 20822317 ~ 20822638 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2242226
ctcacactcaacgtaaacaaaacaaaggagatgatcgtggacttcaggaaacagcagagggaccacccccctatccatatcgacgggacagtagtggagaaggtggaaagttttaagttcctcagcgtacacatcacggacaaactgaaatggtccacccacacagacagcgtgatgaagaaggcgcaacagtgcctcttcaacctcaggaggctgacgaaatttggcttgtcaccaaaaacactcacaaacttttacagatgcacaattgagagcatcctgtcggactgtatcacagcctagtacggcaactgcaccaccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2242226 True 322 TUCP 0.49 1 20822317 20822638

Neighbor

gene id symbol gene type direction distance location
zdhhc22 zdhhc22 coding upstream 118460 20700975 ~ 20703857 (+)
ngb ngb2 coding upstream 190323 20626894 ~ 20631994 (+)
fam161b LOC106611030 coding upstream 200504 20618262 ~ 20621813 (+)
entpd5a LOC106611031 coding upstream 216764 20593865 ~ 20605553 (+)
LOC118944141 NA coding upstream 243496 20565223 ~ 20578821 (+)
LOC118944365 LOC106611023 coding downstream 17318 20839956 ~ 20845780 (+)
exoc5 exoc5 coding downstream 33000 20855638 ~ 20872478 (+)
otx2b LOC107085600 coding downstream 147378 20970016 ~ 20976099 (+)
LOC118944389 NA coding downstream 245004 21067642 ~ 21067775 (+)
LOC110504348 lpp60 coding downstream 365657 21188295 ~ 21208795 (+)
G1960901 LOC106611025 non-coding upstream 92812 20729037 ~ 20729505 (+)
G1960900 NA non-coding upstream 94948 20726939 ~ 20727369 (+)
G1960860 NA non-coding upstream 113495 20704905 ~ 20708822 (+)
G1960862 NA non-coding upstream 173459 20648298 ~ 20648858 (+)
G1960846 NA non-coding upstream 199431 20622468 ~ 20622886 (+)
G1960984 NA non-coding downstream 7959 20830597 ~ 20830925 (+)
G1960992 NA non-coding downstream 19783 20842421 ~ 20842656 (+)
G1960959 NA non-coding downstream 56076 20878714 ~ 20879760 (+)
G1960963 NA non-coding downstream 57326 20879964 ~ 20880306 (+)
G1960851 NA other upstream 186705 20634139 ~ 20635612 (+)
G1960756 NA other upstream 403011 20418994 ~ 20419306 (+)
LOC110505516 LOC106611074 other upstream 1672117 19132397 ~ 19150399 (+)
G1959241 LOC106613263 other upstream 1673961 19147948 ~ 19148356 (+)
G1957752 LOC106610850 other upstream 2868829 17948648 ~ 17953488 (+)
G1961468 NA other downstream 216567 21039205 ~ 21039800 (+)
G1961492 NA other downstream 245326 21067964 ~ 21068669 (+)
G1962316 NA other downstream 969545 21792183 ~ 21844010 (+)
LOC110505603 LOC106610998 other downstream 1015868 21838453 ~ 21886964 (+)
G1962880 rtn1 other downstream 1446317 22250058 ~ 22274663 (+)

Expression


Co-expression Network