Gene
RNA
| Item | Value |
|---|---|
| gene id | G1961428 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 20976322 ~ 20976930 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2242801 | True | 609 | lncRNA | 0.36 | 1 | 20976322 | 20976930 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| otx2b | LOC107085600 | coding | upstream | 223 | 20970016 ~ 20976099 (+) |
| exoc5 | exoc5 | coding | upstream | 103844 | 20855638 ~ 20872478 (+) |
| LOC118944365 | LOC106611023 | coding | upstream | 130542 | 20839956 ~ 20845780 (+) |
| slc35f4 | slc35f4 | coding | upstream | 136661 | 20814027 ~ 20839661 (+) |
| zdhhc22 | zdhhc22 | coding | upstream | 272465 | 20700975 ~ 20703857 (+) |
| LOC118944389 | NA | coding | downstream | 90712 | 21067642 ~ 21067775 (+) |
| LOC110504348 | lpp60 | coding | downstream | 211365 | 21188295 ~ 21208795 (+) |
| LOC118944379 | NA | coding | downstream | 237348 | 21214278 ~ 21214330 (+) |
| LOC110505584 | NA | coding | downstream | 245436 | 21222366 ~ 21223516 (+) |
| LOC110505582 | LOC106610923 | coding | downstream | 250520 | 21227450 ~ 21323763 (+) |
| G1961026 | NA | non-coding | upstream | 50358 | 20925724 ~ 20925964 (+) |
| G1961020 | NA | non-coding | upstream | 61638 | 20914431 ~ 20914684 (+) |
| G1961016 | NA | non-coding | upstream | 68469 | 20907565 ~ 20907853 (+) |
| G1961009 | NA | non-coding | upstream | 80066 | 20896045 ~ 20896256 (+) |
| G1961004 | NA | non-coding | upstream | 90038 | 20885977 ~ 20886284 (+) |
| G1961430 | NA | non-coding | downstream | 6691 | 20983621 ~ 20984201 (+) |
| G1961432 | NA | non-coding | downstream | 7846 | 20984776 ~ 20985459 (+) |
| G1961433 | NA | non-coding | downstream | 8597 | 20985527 ~ 20985945 (+) |
| G1961434 | NA | non-coding | downstream | 9317 | 20986247 ~ 20986500 (+) |
| G1961449 | NA | non-coding | downstream | 39666 | 21016596 ~ 21016813 (+) |
| G1960977 | NA | other | upstream | 153684 | 20822317 ~ 20822638 (+) |
| G1960851 | NA | other | upstream | 340710 | 20634139 ~ 20635612 (+) |
| G1960756 | NA | other | upstream | 557016 | 20418994 ~ 20419306 (+) |
| LOC110505516 | LOC106611074 | other | upstream | 1826122 | 19132397 ~ 19150399 (+) |
| G1959241 | LOC106613263 | other | upstream | 1827966 | 19147948 ~ 19148356 (+) |
| G1961468 | NA | other | downstream | 62275 | 21039205 ~ 21039800 (+) |
| G1961492 | NA | other | downstream | 91034 | 21067964 ~ 21068669 (+) |
| G1962316 | NA | other | downstream | 815253 | 21792183 ~ 21844010 (+) |
| LOC110505603 | LOC106610998 | other | downstream | 861576 | 21838453 ~ 21886964 (+) |
| G1962880 | rtn1 | other | downstream | 1292025 | 22250058 ~ 22274663 (+) |
