G1961430


Basic Information

Item Value
gene id G1961430
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 20983621 ~ 20984201 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2242803
agtttgaaggtaggccttgaaatacatccacaggtacacccccaattgactcaaatgatgtcaattagcctatcagaagcttctaaagccatgatataatttcctggaattttacaagctgtttacaggcaaagtcaacttagtgtatgtaaacgtctgacccactggaattgtaatacagtgatcgcagctcgctggtcaccatagcatcacccacctgtagcacgcgctacagcaggtatatctctctggtcacccccaaaaccaattctttctttggccgcctctccttccagttctctgctgccattgactggaacaaactacaaaaatctctgaaactggaaacacttatctccctcactagctttaagcaccaactgtcagagcagctcacagattactgcacctgtacatagcccacctataatttagcccaaacaactacctctttccctactgtatttattttatttattttgctcctttgcaccccattatttttatttctactttgcacattcttccactgcaaatctaccattccagcattttacttgctatattgtatttactttgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2242803 True 581 lncRNA 0.41 1 20983621 20984201

Neighbor

gene id symbol gene type direction distance location
otx2b LOC107085600 coding upstream 7522 20970016 ~ 20976099 (+)
exoc5 exoc5 coding upstream 111143 20855638 ~ 20872478 (+)
LOC118944365 LOC106611023 coding upstream 137841 20839956 ~ 20845780 (+)
slc35f4 slc35f4 coding upstream 143960 20814027 ~ 20839661 (+)
zdhhc22 zdhhc22 coding upstream 279764 20700975 ~ 20703857 (+)
LOC118944389 NA coding downstream 83441 21067642 ~ 21067775 (+)
LOC110504348 lpp60 coding downstream 204094 21188295 ~ 21208795 (+)
LOC118944379 NA coding downstream 230077 21214278 ~ 21214330 (+)
LOC110505584 NA coding downstream 238165 21222366 ~ 21223516 (+)
LOC110505582 LOC106610923 coding downstream 243249 21227450 ~ 21323763 (+)
G1961428 NA non-coding upstream 6691 20976322 ~ 20976930 (+)
G1961026 NA non-coding upstream 57657 20925724 ~ 20925964 (+)
G1961020 NA non-coding upstream 68937 20914431 ~ 20914684 (+)
G1961016 NA non-coding upstream 75768 20907565 ~ 20907853 (+)
G1961009 NA non-coding upstream 87365 20896045 ~ 20896256 (+)
G1961432 NA non-coding downstream 575 20984776 ~ 20985459 (+)
G1961433 NA non-coding downstream 1326 20985527 ~ 20985945 (+)
G1961434 NA non-coding downstream 2046 20986247 ~ 20986500 (+)
G1961449 NA non-coding downstream 32395 21016596 ~ 21016813 (+)
G1961462 NA non-coding downstream 45071 21029272 ~ 21029539 (+)
G1960977 NA other upstream 160983 20822317 ~ 20822638 (+)
G1960851 NA other upstream 348009 20634139 ~ 20635612 (+)
G1960756 NA other upstream 564315 20418994 ~ 20419306 (+)
LOC110505516 LOC106611074 other upstream 1833421 19132397 ~ 19150399 (+)
G1959241 LOC106613263 other upstream 1835265 19147948 ~ 19148356 (+)
G1961468 NA other downstream 55004 21039205 ~ 21039800 (+)
G1961492 NA other downstream 83763 21067964 ~ 21068669 (+)
G1962316 NA other downstream 807982 21792183 ~ 21844010 (+)
LOC110505603 LOC106610998 other downstream 854305 21838453 ~ 21886964 (+)
G1962880 rtn1 other downstream 1284754 22250058 ~ 22274663 (+)

Expression


Co-expression Network