G1961449


Basic Information

Item Value
gene id G1961449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 21016596 ~ 21016813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2242823
TATTCATTCATGTATCACTATGGATGTTAATAAACATTGTTCAAAGTGTGCTGGTTTAGGTTTTCACAAACCCAATgtgaatatacagtacagtactgtagagcaACATTACCAGCACATTAGACATGGAAGGAACCACATATCCTTTTTCATGTTGTTGCGTATAAACACTTGACCTCTTCttcaaaataatattttagcAGGGTTCAGAGCTAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2242823 True 218 lncRNA 0.34 1 21016596 21016813

Neighbor

gene id symbol gene type direction distance location
otx2b LOC107085600 coding upstream 40497 20970016 ~ 20976099 (+)
exoc5 exoc5 coding upstream 144118 20855638 ~ 20872478 (+)
LOC118944365 LOC106611023 coding upstream 170816 20839956 ~ 20845780 (+)
slc35f4 slc35f4 coding upstream 176935 20814027 ~ 20839661 (+)
zdhhc22 zdhhc22 coding upstream 312739 20700975 ~ 20703857 (+)
LOC118944389 NA coding downstream 50829 21067642 ~ 21067775 (+)
LOC110504348 lpp60 coding downstream 171482 21188295 ~ 21208795 (+)
LOC118944379 NA coding downstream 197465 21214278 ~ 21214330 (+)
LOC110505584 NA coding downstream 205553 21222366 ~ 21223516 (+)
LOC110505582 LOC106610923 coding downstream 210637 21227450 ~ 21323763 (+)
G1961434 NA non-coding upstream 30096 20986247 ~ 20986500 (+)
G1961433 NA non-coding upstream 30651 20985527 ~ 20985945 (+)
G1961432 NA non-coding upstream 31137 20984776 ~ 20985459 (+)
G1961430 NA non-coding upstream 32395 20983621 ~ 20984201 (+)
G1961428 NA non-coding upstream 39666 20976322 ~ 20976930 (+)
G1961462 NA non-coding downstream 12459 21029272 ~ 21029539 (+)
G1961470 NA non-coding downstream 26609 21043422 ~ 21043759 (+)
G1961482 NA non-coding downstream 41457 21058270 ~ 21058517 (+)
G1961491 NA non-coding downstream 54484 21071297 ~ 21073200 (+)
G1961493 peli2 non-coding downstream 56882 21073695 ~ 21074857 (+)
G1960977 NA other upstream 193958 20822317 ~ 20822638 (+)
G1960851 NA other upstream 380984 20634139 ~ 20635612 (+)
G1960756 NA other upstream 597290 20418994 ~ 20419306 (+)
LOC110505516 LOC106611074 other upstream 1866396 19132397 ~ 19150399 (+)
G1959241 LOC106613263 other upstream 1868240 19147948 ~ 19148356 (+)
G1961468 NA other downstream 22392 21039205 ~ 21039800 (+)
G1961492 NA other downstream 51151 21067964 ~ 21068669 (+)
G1962316 NA other downstream 775370 21792183 ~ 21844010 (+)
LOC110505603 LOC106610998 other downstream 821693 21838453 ~ 21886964 (+)
G1962880 rtn1 other downstream 1252142 22250058 ~ 22274663 (+)

Expression


Co-expression Network