G1962508


Basic Information

Item Value
gene id G1962508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22091435 ~ 22091739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2243965
atttcacatgctgttgtgcaaatggaatagacaacaggtggaaattataggcaattagcaagacacccccaataaaggagtggttctgcaggtggtgaccaaagaccacttctcagttcctatgcttcctggctgatgttttggtcacttttgaatgctggcggtgctttcactctagtggtagcatgagatggagccacacaagtggctcaggtagtgcagctcatccaggatggcacatcaatgcgagctgtggcaagaaggtttactgtgtctgtcagcgtagtgtccagagcatggaggcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2243965 True 305 lncRNA 0.49 1 22091435 22091739

Neighbor

gene id symbol gene type direction distance location
LOC110505607 LOC106610991 coding upstream 75425 21999690 ~ 22016010 (+)
chmp3 LOC106610994 coding upstream 93853 21990811 ~ 21997582 (+)
itpk1b LOC106597151 coding upstream 124306 21907436 ~ 21967129 (+)
LOC110505603 LOC106610998 coding upstream 204471 21838453 ~ 21886964 (+)
LOC110505601 LOC106611002 coding upstream 319553 21758745 ~ 21771882 (+)
LOC110505613 LOC106610987 coding downstream 26029 22117768 ~ 22171900 (+)
kif15 kif15 coding downstream 94460 22186199 ~ 22206709 (+)
LOC110504207 LOC106610980 coding downstream 131375 22223114 ~ 22249992 (+)
lrrc9 LOC106610979 coding downstream 205273 22297012 ~ 22318009 (+)
LOC110504208 LOC106598670 coding downstream 264235 22355974 ~ 22365214 (+)
G1962399 NA non-coding upstream 69786 22019640 ~ 22021649 (+)
G1962443 NA non-coding upstream 92892 21998252 ~ 21998543 (+)
G1962396 NA non-coding upstream 101481 21988062 ~ 21989954 (+)
G1962438 NA non-coding upstream 115143 21975971 ~ 21976292 (+)
G1962509 NA non-coding downstream 5681 22097420 ~ 22097782 (+)
G1962510 NA non-coding downstream 6199 22097938 ~ 22098255 (+)
G1962511 NA non-coding downstream 16853 22108592 ~ 22108844 (+)
G1962512 NA non-coding downstream 20124 22111863 ~ 22112137 (+)
G1962469 NA non-coding downstream 21294 22113033 ~ 22113316 (+)
G1962316 NA other upstream 247425 21792183 ~ 21844010 (+)
G1961492 NA other upstream 1022766 21067964 ~ 21068669 (+)
G1961468 NA other upstream 1051635 21039205 ~ 21039800 (+)
G1960977 NA other upstream 1268797 20822317 ~ 20822638 (+)
G1962880 rtn1 other downstream 177216 22250058 ~ 22274663 (+)
G1962949 NA other downstream 300852 22392591 ~ 22392956 (+)
G1963734 NA other downstream 826207 22917946 ~ 22918686 (+)
G1964177 NA other downstream 1514195 23605934 ~ 23613765 (+)

Expression


Co-expression Network