G1962509


Basic Information

Item Value
gene id G1962509
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22097420 ~ 22097782 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2243966
GGGGTAAATCAGTCTATGTTTCtcatgtttttctttctttttactctgAAAGACAATGAAATCATGCTTTTGTTGCTTAACCAGTATGCACTCCTCTTCACTCCACCCCATAGTGCTTCTCTATTTATTACAAAGGATTTGCTGCTAGTCTTACAAGAAGCTAAAATGACTATGTAGGCTGATGACTACACATCAGCACCCACAGCCAGTGAGCTCACTGAGACGCTTAGCAAGGAGTTACAGTCAGTGTCAAAATGGGTAATGACCAAATAACTGgtcttaaatacatctaaaacCTTCCTCTTAGACCACAACCTCAGCTGTAGTTTGACATAAAGGCTGTGCCCATTGAAGAAGTTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2243966 True 363 lncRNA 0.40 1 22097420 22097782

Neighbor

gene id symbol gene type direction distance location
LOC110505607 LOC106610991 coding upstream 81410 21999690 ~ 22016010 (+)
chmp3 LOC106610994 coding upstream 99838 21990811 ~ 21997582 (+)
itpk1b LOC106597151 coding upstream 130291 21907436 ~ 21967129 (+)
LOC110505603 LOC106610998 coding upstream 210456 21838453 ~ 21886964 (+)
LOC110505601 LOC106611002 coding upstream 325538 21758745 ~ 21771882 (+)
LOC110505613 LOC106610987 coding downstream 19986 22117768 ~ 22171900 (+)
kif15 kif15 coding downstream 88417 22186199 ~ 22206709 (+)
LOC110504207 LOC106610980 coding downstream 125332 22223114 ~ 22249992 (+)
lrrc9 LOC106610979 coding downstream 199230 22297012 ~ 22318009 (+)
LOC110504208 LOC106598670 coding downstream 258192 22355974 ~ 22365214 (+)
G1962508 NA non-coding upstream 5681 22091435 ~ 22091739 (+)
G1962399 NA non-coding upstream 75771 22019640 ~ 22021649 (+)
G1962443 NA non-coding upstream 98877 21998252 ~ 21998543 (+)
G1962396 NA non-coding upstream 107466 21988062 ~ 21989954 (+)
G1962510 NA non-coding downstream 156 22097938 ~ 22098255 (+)
G1962511 NA non-coding downstream 10810 22108592 ~ 22108844 (+)
G1962512 NA non-coding downstream 14081 22111863 ~ 22112137 (+)
G1962469 NA non-coding downstream 15251 22113033 ~ 22113316 (+)
G1962513 NA non-coding downstream 15540 22113322 ~ 22113559 (+)
G1962316 NA other upstream 253410 21792183 ~ 21844010 (+)
G1961492 NA other upstream 1028751 21067964 ~ 21068669 (+)
G1961468 NA other upstream 1057620 21039205 ~ 21039800 (+)
G1960977 NA other upstream 1274782 20822317 ~ 20822638 (+)
G1962880 rtn1 other downstream 171173 22250058 ~ 22274663 (+)
G1962949 NA other downstream 294809 22392591 ~ 22392956 (+)
G1963734 NA other downstream 820164 22917946 ~ 22918686 (+)
G1964177 NA other downstream 1508152 23605934 ~ 23613765 (+)

Expression


Co-expression Network