Gene
RNA
| Item | Value |
|---|---|
| gene id | G1962469 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 22113033 ~ 22113316 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2243925 | True | 284 | lncRNA | 0.43 | 1 | 22113033 | 22113316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505607 | LOC106610991 | coding | upstream | 97023 | 21999690 ~ 22016010 (+) |
| chmp3 | LOC106610994 | coding | upstream | 115451 | 21990811 ~ 21997582 (+) |
| itpk1b | LOC106597151 | coding | upstream | 145904 | 21907436 ~ 21967129 (+) |
| LOC110505603 | LOC106610998 | coding | upstream | 226069 | 21838453 ~ 21886964 (+) |
| LOC110505601 | LOC106611002 | coding | upstream | 341151 | 21758745 ~ 21771882 (+) |
| LOC110505613 | LOC106610987 | coding | downstream | 4452 | 22117768 ~ 22171900 (+) |
| kif15 | kif15 | coding | downstream | 72883 | 22186199 ~ 22206709 (+) |
| LOC110504207 | LOC106610980 | coding | downstream | 109798 | 22223114 ~ 22249992 (+) |
| lrrc9 | LOC106610979 | coding | downstream | 183696 | 22297012 ~ 22318009 (+) |
| LOC110504208 | LOC106598670 | coding | downstream | 242658 | 22355974 ~ 22365214 (+) |
| G1962512 | NA | non-coding | upstream | 896 | 22111863 ~ 22112137 (+) |
| G1962511 | NA | non-coding | upstream | 4189 | 22108592 ~ 22108844 (+) |
| G1962510 | NA | non-coding | upstream | 14778 | 22097938 ~ 22098255 (+) |
| G1962509 | NA | non-coding | upstream | 15251 | 22097420 ~ 22097782 (+) |
| G1962508 | NA | non-coding | upstream | 21294 | 22091435 ~ 22091739 (+) |
| G1962513 | NA | non-coding | downstream | 6 | 22113322 ~ 22113559 (+) |
| zfyve28 | LOC106610988 | non-coding | downstream | 2453 | 22053375 ~ 22117130 (+) |
| G1962815 | NA | non-coding | downstream | 12404 | 22125720 ~ 22126088 (+) |
| G1962816 | NA | non-coding | downstream | 14220 | 22127536 ~ 22127736 (+) |
| G1962838 | LOC106610986 | non-coding | downstream | 62891 | 22176207 ~ 22178737 (+) |
| G1962316 | NA | other | upstream | 269023 | 21792183 ~ 21844010 (+) |
| G1961492 | NA | other | upstream | 1044364 | 21067964 ~ 21068669 (+) |
| G1961468 | NA | other | upstream | 1073233 | 21039205 ~ 21039800 (+) |
| G1960977 | NA | other | upstream | 1290395 | 20822317 ~ 20822638 (+) |
| G1962880 | rtn1 | other | downstream | 155639 | 22250058 ~ 22274663 (+) |
| G1962949 | NA | other | downstream | 279275 | 22392591 ~ 22392956 (+) |
| G1963734 | NA | other | downstream | 804630 | 22917946 ~ 22918686 (+) |
| G1964177 | NA | other | downstream | 1492618 | 23605934 ~ 23613765 (+) |
