G1962949


Basic Information

Item Value
gene id G1962949
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22392591 ~ 22392956 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2244488
acgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttattcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgcgactgggacagagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcataaatgaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2244488 True 366 TUCP 0.44 1 22392591 22392956

Neighbor

gene id symbol gene type direction distance location
ppm1aa LOC106610975 coding upstream 5881 22372957 ~ 22386710 (+)
LOC110504208 LOC106598670 coding upstream 27377 22355974 ~ 22365214 (+)
lrrc9 LOC106610979 coding upstream 74582 22297012 ~ 22318009 (+)
LOC110504207 LOC106610980 coding upstream 142599 22223114 ~ 22249992 (+)
kif15 kif15 coding upstream 185882 22186199 ~ 22206709 (+)
six6a six6 coding downstream 72725 22465681 ~ 22473989 (+)
mnat1 mnat1 coding downstream 119638 22512594 ~ 22569987 (+)
slc38a6 slc38a6 coding downstream 179501 22572457 ~ 22585958 (+)
prkcha LOC100380676 coding downstream 211332 22604288 ~ 22655351 (+)
LOC110505629 LOC106610969 coding downstream 272964 22665920 ~ 22696558 (+)
G1962929 NA non-coding upstream 58932 22333234 ~ 22333659 (+)
G1962927 NA non-coding upstream 62414 22329965 ~ 22330177 (+)
G1962923 NA non-coding upstream 69406 22322954 ~ 22323185 (+)
G1962920 NA non-coding upstream 71269 22320952 ~ 22321322 (+)
G1962919 NA non-coding upstream 71692 22320441 ~ 22320899 (+)
G1962956 NA non-coding downstream 9172 22402128 ~ 22402863 (+)
G1962963 NA non-coding downstream 16887 22409843 ~ 22410127 (+)
G1962965 NA non-coding downstream 18351 22411307 ~ 22411510 (+)
G1962972 NA non-coding downstream 28888 22421844 ~ 22422085 (+)
G1962981 NA non-coding downstream 35396 22428352 ~ 22428639 (+)
G1962880 rtn1 other upstream 117928 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 524558 21838453 ~ 21886964 (+)
G1962316 NA other upstream 548581 21792183 ~ 21844010 (+)
G1961492 NA other upstream 1323922 21067964 ~ 21068669 (+)
G1963734 NA other downstream 524990 22917946 ~ 22918686 (+)
G1964177 NA other downstream 1212978 23605934 ~ 23613765 (+)
G1964499 NA other downstream 1683565 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1967481 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1968132 24361088 ~ 24361482 (+)

Expression


Co-expression Network