G1962972


Basic Information

Item Value
gene id G1962972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22421844 ~ 22422085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2244514
atcagcttcttgatatgccacacctgtcagatggatggattatcttggcaaaggacaaatgctcactaacggggatttgagagaaataagctttttgttcatatggaaaatgtctgggatattttatttctgtcacggatccctccggaactttcatcacggacacctgtcccctattcacattgattagtatttgtatatatgtgccctttggtttccattgtcttgtcgattattgttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2244514 True 242 lncRNA 0.40 1 22421844 22422085

Neighbor

gene id symbol gene type direction distance location
ppm1aa LOC106610975 coding upstream 35134 22372957 ~ 22386710 (+)
LOC110504208 LOC106598670 coding upstream 56630 22355974 ~ 22365214 (+)
lrrc9 LOC106610979 coding upstream 103835 22297012 ~ 22318009 (+)
LOC110504207 LOC106610980 coding upstream 171852 22223114 ~ 22249992 (+)
kif15 kif15 coding upstream 215135 22186199 ~ 22206709 (+)
six6a six6 coding downstream 43596 22465681 ~ 22473989 (+)
mnat1 mnat1 coding downstream 90509 22512594 ~ 22569987 (+)
slc38a6 slc38a6 coding downstream 150372 22572457 ~ 22585958 (+)
prkcha LOC100380676 coding downstream 182203 22604288 ~ 22655351 (+)
LOC110505629 LOC106610969 coding downstream 243835 22665920 ~ 22696558 (+)
G1962965 NA non-coding upstream 10334 22411307 ~ 22411510 (+)
G1962963 NA non-coding upstream 11717 22409843 ~ 22410127 (+)
G1962956 NA non-coding upstream 18981 22402128 ~ 22402863 (+)
G1962929 NA non-coding upstream 88185 22333234 ~ 22333659 (+)
G1962927 NA non-coding upstream 91667 22329965 ~ 22330177 (+)
G1962981 NA non-coding downstream 6267 22428352 ~ 22428639 (+)
G1962983 NA non-coding downstream 8992 22431077 ~ 22431307 (+)
G1962984 NA non-coding downstream 9782 22431867 ~ 22432069 (+)
G1962986 NA non-coding downstream 10811 22432896 ~ 22433204 (+)
G1962991 NA non-coding downstream 20714 22442799 ~ 22443113 (+)
G1962949 NA other upstream 28888 22392591 ~ 22392956 (+)
G1962880 rtn1 other upstream 147181 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 553811 21838453 ~ 21886964 (+)
G1962316 NA other upstream 577834 21792183 ~ 21844010 (+)
G1963734 NA other downstream 495861 22917946 ~ 22918686 (+)
G1964177 NA other downstream 1183849 23605934 ~ 23613765 (+)
G1964499 NA other downstream 1654436 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1938352 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1939003 24361088 ~ 24361482 (+)

Expression


Co-expression Network