G1963227


Basic Information

Item Value
gene id G1963227
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22477301 ~ 22477547 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2244805
gaaatggtttgtcgagatcggtgtggaagaacttgactggcctgcactgagccctgacctcaaccccatcgaacacctttgggatgaattggaatgccgactgcgagccaggcctaatcgcccaacatcagtgcctgacatcactaatgctcttgggGCTAAATGAAAGCCAGTCcccccagcaatgttccaacatctagtggaaagccttcccagaagagtggaggttgttatactttagcagcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2244805 True 247 lncRNA 0.51 1 22477301 22477547

Neighbor

gene id symbol gene type direction distance location
six6a six6 coding upstream 3312 22465681 ~ 22473989 (+)
ppm1aa LOC106610975 coding upstream 90591 22372957 ~ 22386710 (+)
LOC110504208 LOC106598670 coding upstream 112087 22355974 ~ 22365214 (+)
lrrc9 LOC106610979 coding upstream 159292 22297012 ~ 22318009 (+)
LOC110504207 LOC106610980 coding upstream 227309 22223114 ~ 22249992 (+)
mnat1 mnat1 coding downstream 35047 22512594 ~ 22569987 (+)
slc38a6 slc38a6 coding downstream 94910 22572457 ~ 22585958 (+)
prkcha LOC100380676 coding downstream 126741 22604288 ~ 22655351 (+)
LOC110505629 LOC106610969 coding downstream 188373 22665920 ~ 22696558 (+)
LOC110505630 NA coding downstream 201153 22678700 ~ 22680020 (+)
G1963010 NA non-coding upstream 1944 22474794 ~ 22475357 (+)
G1962991 NA non-coding upstream 34188 22442799 ~ 22443113 (+)
G1962986 NA non-coding upstream 44097 22432896 ~ 22433204 (+)
G1962984 NA non-coding upstream 45232 22431867 ~ 22432069 (+)
G1962983 NA non-coding upstream 45994 22431077 ~ 22431307 (+)
G1963240 NA non-coding downstream 10323 22487870 ~ 22488100 (+)
G1963250 NA non-coding downstream 15733 22493280 ~ 22493490 (+)
G1963272 NA non-coding downstream 29135 22506682 ~ 22507639 (+)
G1963328 NA non-coding downstream 119006 22596553 ~ 22596991 (+)
G1963317 NA non-coding downstream 220142 22697689 ~ 22699363 (+)
G1962949 NA other upstream 84345 22392591 ~ 22392956 (+)
G1962880 rtn1 other upstream 202638 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 609268 21838453 ~ 21886964 (+)
G1962316 NA other upstream 633291 21792183 ~ 21844010 (+)
G1963734 NA other downstream 440399 22917946 ~ 22918686 (+)
G1964177 NA other downstream 1128387 23605934 ~ 23613765 (+)
G1964499 NA other downstream 1598974 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1882890 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1883541 24361088 ~ 24361482 (+)

Expression


Co-expression Network