G1963573


Basic Information

Item Value
gene id G1963573
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22786038 ~ 22786497 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245173
gtcagggGGTAATAACACTGATAGCTAAGCCTAAAAAATAAGTGCTGGTCATCGATAATTGgcgtccaatttgtcttcttaataatgacAAGATTACTTactacttgcaaaaataattaaagaagtcctggatgcaatcattgatgaaacacagtctggcttcatgaggaacagacatacttctaacaatgtcagactagtattagacCTAATAACTGAGGATAGCGTCATCTtattttttagatttttataaagcatttgacacagtagagcatcagttcctcttccactcccttgagagacttggctttggggattttttctgtaaggctattaagactctatgcaaatggtaacagctctatcaaattgaaatatggcacctcacctagatttgagttaaagagaggaattaggcaaggttgtcctatctctccgCACCTctttttattaatcaccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245173 True 460 lncRNA 0.37 1 22786038 22786497

Neighbor

gene id symbol gene type direction distance location
LOC110504209 NA coding upstream 5998 22770562 ~ 22780040 (+)
LOC110504329 LOC105895945 coding upstream 17673 22764658 ~ 22768365 (+)
LOC110505633 LOC106610968 coding upstream 54739 22727729 ~ 22731299 (+)
LOC110505629 LOC106610969 coding upstream 89480 22665920 ~ 22696558 (+)
LOC110505630 NA coding upstream 106018 22678700 ~ 22680020 (+)
LOC110505634 2a5e coding downstream 6587 22793084 ~ 22865803 (+)
wdr89 wdr89 coding downstream 8979 22795476 ~ 22798055 (+)
LOC110505640 LOC106610963 coding downstream 522101 23308598 ~ 23315795 (+)
LOC110505643 LOC106610958 coding downstream 622862 23409359 ~ 23421308 (+)
LOC110505646 kcrt coding downstream 671161 23457658 ~ 23462167 (+)
G1963552 NA non-coding upstream 12108 22773676 ~ 22773930 (+)
G1963551 NA non-coding upstream 12390 22773441 ~ 22773648 (+)
G1963317 NA non-coding upstream 86675 22697689 ~ 22699363 (+)
G1963328 NA non-coding upstream 189047 22596553 ~ 22596991 (+)
G1963578 NA non-coding downstream 5668 22792165 ~ 22792399 (+)
G1963582 NA non-coding downstream 14017 22800514 ~ 22800799 (+)
G1963606 NA non-coding downstream 81950 22868447 ~ 22868871 (+)
G1963668 NA non-coding downstream 84246 22870743 ~ 22871084 (+)
G1963685 NA non-coding downstream 96120 22882617 ~ 22883005 (+)
G1962949 NA other upstream 393082 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 475237 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 511375 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 918005 21838453 ~ 21886964 (+)
G1962316 NA other upstream 942028 21792183 ~ 21844010 (+)
G1963734 NA other downstream 131449 22917946 ~ 22918686 (+)
G1964177 NA other downstream 819437 23605934 ~ 23613765 (+)
G1964499 NA other downstream 1290024 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1573940 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1574591 24361088 ~ 24361482 (+)

Expression


Co-expression Network