G1963578


Basic Information

Item Value
gene id G1963578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22792165 ~ 22792399 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245178
gttctcatttacaactgcgacctggccatgataaagcaaagcagtgcgacaaaaacaaaacaaagttacacatgggataaacaattgtacagtcaataacacaataaaaaaatctgtatacagtgtgtgcaaattcaggaggtaaggcaataaataggcctatagtggcgaagtaattacaatttagcaatttacactggagtgatagatgtgcagatggggccacagtgtctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245178 True 235 lncRNA 0.39 1 22792165 22792399

Neighbor

gene id symbol gene type direction distance location
LOC110504209 NA coding upstream 12125 22770562 ~ 22780040 (+)
LOC110504329 LOC105895945 coding upstream 23800 22764658 ~ 22768365 (+)
LOC110505633 LOC106610968 coding upstream 60866 22727729 ~ 22731299 (+)
LOC110505629 LOC106610969 coding upstream 95607 22665920 ~ 22696558 (+)
LOC110505634 2a5e coding downstream 685 22793084 ~ 22865803 (+)
wdr89 wdr89 coding downstream 3077 22795476 ~ 22798055 (+)
LOC110505640 LOC106610963 coding downstream 516199 23308598 ~ 23315795 (+)
LOC110505643 LOC106610958 coding downstream 616960 23409359 ~ 23421308 (+)
LOC110505646 kcrt coding downstream 665259 23457658 ~ 23462167 (+)
G1963573 NA non-coding upstream 5668 22786038 ~ 22786497 (+)
G1963552 NA non-coding upstream 18235 22773676 ~ 22773930 (+)
G1963551 NA non-coding upstream 18517 22773441 ~ 22773648 (+)
G1963317 NA non-coding upstream 92802 22697689 ~ 22699363 (+)
G1963582 NA non-coding downstream 8115 22800514 ~ 22800799 (+)
G1963606 NA non-coding downstream 76048 22868447 ~ 22868871 (+)
G1963668 NA non-coding downstream 78344 22870743 ~ 22871084 (+)
G1963685 NA non-coding downstream 90218 22882617 ~ 22883005 (+)
G1963693 NA non-coding downstream 94409 22886808 ~ 22887127 (+)
G1962949 NA other upstream 399209 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 481364 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 517502 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 924132 21838453 ~ 21886964 (+)
G1962316 NA other upstream 948155 21792183 ~ 21844010 (+)
G1963734 NA other downstream 125547 22917946 ~ 22918686 (+)
G1964177 NA other downstream 813535 23605934 ~ 23613765 (+)
G1964499 NA other downstream 1284122 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1568038 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1568689 24361088 ~ 24361482 (+)

Expression


Co-expression Network