G1963582


Basic Information

Item Value
gene id G1963582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22800514 ~ 22800799 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245185
GaaatagataaagggcttcattgccaaaattctGAAGTGTCCCTTTTTAATATGGGTTCAGTTTTAAAGTCTTCAGGGGAGAAATTGTCAACCCATTCCGTAGGTTTACTGTGCCAGCTGCTTCCTGTGGTGTGCTAAAGTTTCTATTTCATTGATTTTTCCTTACTTTCACCCTGAGTTAGAAATTCAAGGTAAAGTAATATGCTAGCGTTATACTTATCAGTTTTATCTTAAGTATCCCATTTCAATTAGATTAACAGTCAAGTATACTTGACAGACACCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245185 True 286 lncRNA 0.37 1 22800514 22800799

Neighbor

gene id symbol gene type direction distance location
wdr89 wdr89 coding upstream 2459 22795476 ~ 22798055 (+)
LOC110504209 NA coding upstream 20474 22770562 ~ 22780040 (+)
LOC110504329 LOC105895945 coding upstream 32149 22764658 ~ 22768365 (+)
LOC110505633 LOC106610968 coding upstream 69215 22727729 ~ 22731299 (+)
LOC110505629 LOC106610969 coding upstream 103956 22665920 ~ 22696558 (+)
LOC110505640 LOC106610963 coding downstream 507799 23308598 ~ 23315795 (+)
LOC110505643 LOC106610958 coding downstream 608560 23409359 ~ 23421308 (+)
LOC110505646 kcrt coding downstream 656859 23457658 ~ 23462167 (+)
LOC110505647 NA coding downstream 707236 23508035 ~ 23518659 (+)
LOC110505653 LOC106610949 coding downstream 895674 23696473 ~ 23704474 (+)
G1963578 NA non-coding upstream 8115 22792165 ~ 22792399 (+)
G1963573 NA non-coding upstream 14017 22786038 ~ 22786497 (+)
G1963552 NA non-coding upstream 26584 22773676 ~ 22773930 (+)
G1963551 NA non-coding upstream 26866 22773441 ~ 22773648 (+)
G1963606 NA non-coding downstream 67648 22868447 ~ 22868871 (+)
G1963668 NA non-coding downstream 69944 22870743 ~ 22871084 (+)
G1963685 NA non-coding downstream 81818 22882617 ~ 22883005 (+)
G1963693 NA non-coding downstream 86009 22886808 ~ 22887127 (+)
G1963729 NA non-coding downstream 112115 22912914 ~ 22913116 (+)
G1962949 NA other upstream 407558 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 489713 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 525851 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 932481 21838453 ~ 21886964 (+)
G1962316 NA other upstream 956504 21792183 ~ 21844010 (+)
G1963734 NA other downstream 117147 22917946 ~ 22918686 (+)
G1964177 NA other downstream 805135 23605934 ~ 23613765 (+)
G1964499 NA other downstream 1275722 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1559638 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1560289 24361088 ~ 24361482 (+)

Expression


Co-expression Network