G1963685


Basic Information

Item Value
gene id G1963685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22882617 ~ 22883005 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245291
GAcaagaactacatacattttgttttataagggcacacatagcctacatatcaatgcatacacacaaactatctaggtcaaataggggagagacGTTGTGCTGTGATgtgtttgctgtttatttgagcaatatgagatggaaggaagttccattcAATAAGGGCTCTCTATATTATACGGTACGCTTTCtttaatttgttctggatttggggactgtgaaaagacccctggtggcatgtctggtgggataagtgtgtgtgtcagagctgtgtgtaagttgactatgcaaacaatttgggattttcaacacgtTTCTTataagaagaagtgatgcagtcactctttcctcaactcttagccaagagagacatGCATGCATTGTATTTCTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245291 True 389 lncRNA 0.40 1 22882617 22883005

Neighbor

gene id symbol gene type direction distance location
LOC110505634 2a5e coding upstream 16814 22793084 ~ 22865803 (+)
wdr89 wdr89 coding upstream 84562 22795476 ~ 22798055 (+)
LOC110504209 NA coding upstream 102577 22770562 ~ 22780040 (+)
LOC110504329 LOC105895945 coding upstream 114252 22764658 ~ 22768365 (+)
LOC110505633 LOC106610968 coding upstream 151318 22727729 ~ 22731299 (+)
LOC110505640 LOC106610963 coding downstream 425593 23308598 ~ 23315795 (+)
LOC110505643 LOC106610958 coding downstream 526354 23409359 ~ 23421308 (+)
LOC110505646 kcrt coding downstream 574653 23457658 ~ 23462167 (+)
LOC110505647 NA coding downstream 625030 23508035 ~ 23518659 (+)
LOC110505653 LOC106610949 coding downstream 813468 23696473 ~ 23704474 (+)
G1963668 NA non-coding upstream 11533 22870743 ~ 22871084 (+)
G1963606 NA non-coding upstream 13746 22868447 ~ 22868871 (+)
G1963582 NA non-coding upstream 81818 22800514 ~ 22800799 (+)
G1963578 NA non-coding upstream 90218 22792165 ~ 22792399 (+)
G1963573 NA non-coding upstream 96120 22786038 ~ 22786497 (+)
G1963693 NA non-coding downstream 3803 22886808 ~ 22887127 (+)
G1963729 NA non-coding downstream 29909 22912914 ~ 22913116 (+)
G1963737 NA non-coding downstream 37840 22920845 ~ 22921045 (+)
G1963740 NA non-coding downstream 39151 22922156 ~ 22922376 (+)
G1963746 NA non-coding downstream 42856 22925861 ~ 22926061 (+)
G1962949 NA other upstream 489661 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 571816 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 607954 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 1014584 21838453 ~ 21886964 (+)
G1962316 NA other upstream 1038607 21792183 ~ 21844010 (+)
G1963734 NA other downstream 34941 22917946 ~ 22918686 (+)
G1964177 NA other downstream 722929 23605934 ~ 23613765 (+)
G1964499 NA other downstream 1193516 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1477432 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1478083 24361088 ~ 24361482 (+)

Expression


Co-expression Network