G1963788


Basic Information

Item Value
gene id G1963788
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 22980068 ~ 23026630 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245397
gtcctttgctgttgttctgggattgatttgcacttttcgcaccaaagtacgttcatctctaagagacagaatgcgtctccttcctgagaggtatgacgactgcgtggtcccatggtgtttatacttgcgtactattgtttttacagatgaacgtggtaccttcaggcgtttggaaattgctcccaagaatgaaccagacttgtggaggtctacaatgacTTTTCTGAGTTcttttctgatttcttttgattgtcccataatgtcaagcaagaggcactgagattgaaggtaggcctcgaAACACATACACAGGTATATACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245397 True 321 lncRNA 0.43 2 22980068 23026630

Neighbor

gene id symbol gene type direction distance location
LOC110505634 2a5e coding upstream 114265 22793084 ~ 22865803 (+)
wdr89 wdr89 coding upstream 182013 22795476 ~ 22798055 (+)
LOC110504209 NA coding upstream 200028 22770562 ~ 22780040 (+)
LOC110504329 LOC105895945 coding upstream 211703 22764658 ~ 22768365 (+)
LOC110505633 LOC106610968 coding upstream 248769 22727729 ~ 22731299 (+)
LOC110505640 LOC106610963 coding downstream 281968 23308598 ~ 23315795 (+)
LOC110505643 LOC106610958 coding downstream 382729 23409359 ~ 23421308 (+)
LOC110505646 kcrt coding downstream 431028 23457658 ~ 23462167 (+)
LOC110505647 NA coding downstream 481405 23508035 ~ 23518659 (+)
LOC110505653 LOC106610949 coding downstream 669843 23696473 ~ 23704474 (+)
G1963754 NA non-coding upstream 47713 22931997 ~ 22932355 (+)
G1963750 NA non-coding upstream 51586 22928194 ~ 22928482 (+)
G1963746 NA non-coding upstream 54007 22925861 ~ 22926061 (+)
G1963740 NA non-coding upstream 57692 22922156 ~ 22922376 (+)
G1963737 NA non-coding upstream 59023 22920845 ~ 22921045 (+)
G1963889 NA non-coding downstream 76082 23102712 ~ 23106096 (+)
G1963903 LOC106610964 non-coding downstream 95425 23122055 ~ 23122293 (+)
G1963914 NA non-coding downstream 106532 23133162 ~ 23133507 (+)
G1963920 LOC106610964 non-coding downstream 110189 23136819 ~ 23137210 (+)
G1963921 NA non-coding downstream 111037 23137667 ~ 23138079 (+)
G1963734 NA other upstream 61382 22917946 ~ 22918686 (+)
G1962949 NA other upstream 587112 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 669267 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 705405 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 1112035 21838453 ~ 21886964 (+)
G1964177 NA other downstream 579304 23605934 ~ 23613765 (+)
G1964499 NA other downstream 1049891 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1333807 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1334458 24361088 ~ 24361482 (+)
G1965396 NA other downstream 1539101 24565731 ~ 24567147 (+)

Expression


Co-expression Network