Gene
RNA
| Item | Value |
|---|---|
| gene id | G1963945 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 23171128 ~ 23171945 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2245575 | True | 818 | lncRNA | 0.42 | 1 | 23171128 | 23171945 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505634 | 2a5e | coding | upstream | 305325 | 22793084 ~ 22865803 (+) |
| wdr89 | wdr89 | coding | upstream | 373073 | 22795476 ~ 22798055 (+) |
| LOC110504209 | NA | coding | upstream | 391088 | 22770562 ~ 22780040 (+) |
| LOC110504329 | LOC105895945 | coding | upstream | 402763 | 22764658 ~ 22768365 (+) |
| LOC110505633 | LOC106610968 | coding | upstream | 439829 | 22727729 ~ 22731299 (+) |
| LOC110505640 | LOC106610963 | coding | downstream | 136653 | 23308598 ~ 23315795 (+) |
| LOC110505643 | LOC106610958 | coding | downstream | 237414 | 23409359 ~ 23421308 (+) |
| LOC110505646 | kcrt | coding | downstream | 285713 | 23457658 ~ 23462167 (+) |
| LOC110505647 | NA | coding | downstream | 336090 | 23508035 ~ 23518659 (+) |
| LOC110505653 | LOC106610949 | coding | downstream | 524528 | 23696473 ~ 23704474 (+) |
| G1963944 | NA | non-coding | upstream | 197 | 23170721 ~ 23170931 (+) |
| G1963934 | NA | non-coding | upstream | 7867 | 23153596 ~ 23163261 (+) |
| G1963921 | NA | non-coding | upstream | 33049 | 23137667 ~ 23138079 (+) |
| G1963920 | LOC106610964 | non-coding | upstream | 33918 | 23136819 ~ 23137210 (+) |
| G1963914 | NA | non-coding | upstream | 37621 | 23133162 ~ 23133507 (+) |
| G1963948 | NA | non-coding | downstream | 2085 | 23174030 ~ 23174237 (+) |
| G1963981 | NA | non-coding | downstream | 50260 | 23222205 ~ 23222509 (+) |
| G1963999 | NA | non-coding | downstream | 79413 | 23251358 ~ 23251745 (+) |
| G1964001 | LOC106609167 | non-coding | downstream | 81381 | 23253326 ~ 23253547 (+) |
| G1964046 | NA | non-coding | downstream | 148771 | 23320716 ~ 23322247 (+) |
| G1963734 | NA | other | upstream | 252442 | 22917946 ~ 22918686 (+) |
| G1962949 | NA | other | upstream | 778172 | 22392591 ~ 22392956 (+) |
| lrrc9 | LOC106610979 | other | upstream | 860327 | 22297012 ~ 22318009 (+) |
| G1962880 | rtn1 | other | upstream | 896465 | 22250058 ~ 22274663 (+) |
| LOC110505603 | LOC106610998 | other | upstream | 1303095 | 21838453 ~ 21886964 (+) |
| G1964177 | NA | other | downstream | 433989 | 23605934 ~ 23613765 (+) |
| G1964499 | NA | other | downstream | 904576 | 24076521 ~ 24076721 (+) |
| G1965262 | NA | other | downstream | 1188492 | 24360437 ~ 24360985 (+) |
| G1965263 | NA | other | downstream | 1189143 | 24361088 ~ 24361482 (+) |
| G1965396 | NA | other | downstream | 1393786 | 24565731 ~ 24567147 (+) |
