G1963948


Basic Information

Item Value
gene id G1963948
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 23174030 ~ 23174237 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245578
tgtgcattctgcagcctcctaacttcactagatgatgcatttccccagaccaccgaacaatagttcacctgactctcaaCCAATGCATGTGTTATTTGCTGAAGGATTTTccctggtaaatatttagctatccttctgattatgcatgctgttttattttttatttttacatagaatagttatttgagacgaccatgataagcagttg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245578 True 208 lncRNA 0.38 1 23174030 23174237

Neighbor

gene id symbol gene type direction distance location
LOC110505634 2a5e coding upstream 308227 22793084 ~ 22865803 (+)
wdr89 wdr89 coding upstream 375975 22795476 ~ 22798055 (+)
LOC110504209 NA coding upstream 393990 22770562 ~ 22780040 (+)
LOC110504329 LOC105895945 coding upstream 405665 22764658 ~ 22768365 (+)
LOC110505633 LOC106610968 coding upstream 442731 22727729 ~ 22731299 (+)
LOC110505640 LOC106610963 coding downstream 134361 23308598 ~ 23315795 (+)
LOC110505643 LOC106610958 coding downstream 235122 23409359 ~ 23421308 (+)
LOC110505646 kcrt coding downstream 283421 23457658 ~ 23462167 (+)
LOC110505647 NA coding downstream 333798 23508035 ~ 23518659 (+)
LOC110505653 LOC106610949 coding downstream 522236 23696473 ~ 23704474 (+)
G1963945 NA non-coding upstream 2085 23171128 ~ 23171945 (+)
G1963944 NA non-coding upstream 3099 23170721 ~ 23170931 (+)
G1963934 NA non-coding upstream 10769 23153596 ~ 23163261 (+)
G1963921 NA non-coding upstream 35951 23137667 ~ 23138079 (+)
G1963920 LOC106610964 non-coding upstream 36820 23136819 ~ 23137210 (+)
G1963981 NA non-coding downstream 47968 23222205 ~ 23222509 (+)
G1963999 NA non-coding downstream 77121 23251358 ~ 23251745 (+)
G1964001 LOC106609167 non-coding downstream 79089 23253326 ~ 23253547 (+)
G1964046 NA non-coding downstream 146479 23320716 ~ 23322247 (+)
G1964055 NA non-coding downstream 161559 23335796 ~ 23336014 (+)
G1963734 NA other upstream 255344 22917946 ~ 22918686 (+)
G1962949 NA other upstream 781074 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 863229 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 899367 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 1305997 21838453 ~ 21886964 (+)
G1964177 NA other downstream 431697 23605934 ~ 23613765 (+)
G1964499 NA other downstream 902284 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1186200 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1186851 24361088 ~ 24361482 (+)
G1965396 NA other downstream 1391494 24565731 ~ 24567147 (+)

Expression


Co-expression Network