G1964592 (LOC106569888)


Basic Information

Item Value
gene id G1964592
gene name LOC106569888
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 23221973 ~ 23222503 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2246307
gtcgttaagacactaacagcttacagacggtaggcaattaaggtcacagttgtgaaaacttaggacactaaagaggcctttctactgacgctgaaaaacaccaaaagaaagatgcccagggtccctgctcatctgcgtgaatgtgcgttaggcatgctgcaaggaggcatgaggactgcagatgtggccagggcaataaattgcaatgtctgtactgtgagatgcctaagacagcgctacagggagacaggacggacagctgatcgtcctcgcagtggcagaccacgtgtaacaacacctgcacatgatctgtacatccgaacatcacacctgtgggacaggtacaggatggcaacaacaactgcccgagttacaccaggaatgcacaattcctccatcagtaacaagactgtccacaataggctgagagaggctggactgagggcttgtaggcctgttgtaaggcagatcctcaccagacatcactggcaacaacgttgccaatgtgcacaaacccaccgttgcttgacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106569888, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2246307 True 531 TUCP 0.51 1 23221973 23222503

Neighbor

gene id symbol gene type direction distance location
LOC110505636 LOC106610964 coding downstream 83813 23106379 ~ 23138160 (-)
LOC110504210 NA coding downstream 267024 22925846 ~ 22954949 (-)
LOC110504330 gphb5 coding downstream 328632 22892083 ~ 22893341 (-)
LOC110505631 LOC106610967 coding downstream 495968 22704448 ~ 22726005 (-)
LOC118944370 NA coding downstream 649497 22570272 ~ 22572476 (-)
brf1a LOC106610962 coding upstream 45041 23267544 ~ 23331891 (-)
LOC110505641 LOC106610961 coding upstream 121900 23344403 ~ 23354010 (-)
LOC110505642 klc1 coding upstream 135152 23357655 ~ 23393079 (-)
trmt61a trm61 coding upstream 220419 23442922 ~ 23456284 (-)
LOC110505645 LOC106610955 coding upstream 239732 23462235 ~ 23501934 (-)
G1964526 NA non-coding downstream 34301 23183295 ~ 23187672 (-)
G1964557 NA non-coding downstream 49788 23171991 ~ 23172185 (-)
G1964556 NA non-coding downstream 50295 23171291 ~ 23171678 (-)
G1964548 NA non-coding downstream 76422 23145187 ~ 23145551 (-)
G1964541 NA non-coding downstream 88466 23132958 ~ 23133507 (-)
G1964596 NA non-coding upstream 4670 23227173 ~ 23227378 (-)
G1964600 NA non-coding upstream 10517 23233020 ~ 23233510 (-)
G1964607 NA non-coding upstream 18528 23241031 ~ 23241251 (-)
G1964611 NA non-coding upstream 30086 23252589 ~ 23252845 (-)
G1964615 NA non-coding upstream 32334 23254837 ~ 23255044 (-)
G1964564 NA other downstream 53860 23165032 ~ 23168113 (-)
G1963846 NA other downstream 176269 23036891 ~ 23045704 (-)
G1962803 LOC106610988 other downstream 1125477 22095519 ~ 22096496 (-)
G1962524 LOC106610994 other downstream 1224403 21990844 ~ 21997570 (-)
G1962691 NA other downstream 1335038 21876057 ~ 21886935 (-)
G1964728 NA other upstream 203060 23425563 ~ 23428841 (-)
G1967882 NA other upstream 3312861 26535364 ~ 26538708 (-)
LOC110505716 LOC106024658 other upstream 3494181 26716542 ~ 26765410 (-)
G1969699 LOC100380709 other upstream 4877418 28099921 ~ 28101436 (-)
G1969724 NA other upstream 4920935 28143438 ~ 28143762 (-)

Expression


Co-expression Network