G1963981


Basic Information

Item Value
gene id G1963981
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 23222205 ~ 23222509 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245614
ggtgttgttacacgtggtctgccactgcgaggacgatcagctgtccgtcctgtctccctgtagcgctgtcttaggcatctcacagtacagacattgcaatttattgccctggccacatctgcagtcctcatgcctccttgcagcatgcctaacgcacattcacgcagatgagcagggaccctgggcatctttcttttggtgtttttcagcgtcagtagaaaggcctctttagtgtcctaagttttcacaactgtgaccttaattgcctaccgtctgtaagctgttagtgtcttaacgaccgttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245614 True 305 lncRNA 0.50 1 23222205 23222509

Neighbor

gene id symbol gene type direction distance location
LOC110505634 2a5e coding upstream 356402 22793084 ~ 22865803 (+)
wdr89 wdr89 coding upstream 424150 22795476 ~ 22798055 (+)
LOC110504209 NA coding upstream 442165 22770562 ~ 22780040 (+)
LOC110504329 LOC105895945 coding upstream 453840 22764658 ~ 22768365 (+)
LOC110505633 LOC106610968 coding upstream 490906 22727729 ~ 22731299 (+)
LOC110505640 LOC106610963 coding downstream 86089 23308598 ~ 23315795 (+)
LOC110505643 LOC106610958 coding downstream 186850 23409359 ~ 23421308 (+)
LOC110505646 kcrt coding downstream 235149 23457658 ~ 23462167 (+)
LOC110505647 NA coding downstream 285526 23508035 ~ 23518659 (+)
LOC110505653 LOC106610949 coding downstream 473964 23696473 ~ 23704474 (+)
G1963948 NA non-coding upstream 47968 23174030 ~ 23174237 (+)
G1963945 NA non-coding upstream 50260 23171128 ~ 23171945 (+)
G1963944 NA non-coding upstream 51274 23170721 ~ 23170931 (+)
G1963934 NA non-coding upstream 58944 23153596 ~ 23163261 (+)
G1963921 NA non-coding upstream 84126 23137667 ~ 23138079 (+)
G1963999 NA non-coding downstream 28849 23251358 ~ 23251745 (+)
G1964001 LOC106609167 non-coding downstream 30817 23253326 ~ 23253547 (+)
G1964046 NA non-coding downstream 98207 23320716 ~ 23322247 (+)
G1964055 NA non-coding downstream 113287 23335796 ~ 23336014 (+)
G1964059 NA non-coding downstream 116519 23339028 ~ 23339433 (+)
G1963734 NA other upstream 303519 22917946 ~ 22918686 (+)
G1962949 NA other upstream 829249 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 911404 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 947542 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 1354172 21838453 ~ 21886964 (+)
G1964177 NA other downstream 383425 23605934 ~ 23613765 (+)
G1964499 NA other downstream 854012 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1137928 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1138579 24361088 ~ 24361482 (+)
G1965396 NA other downstream 1343222 24565731 ~ 24567147 (+)

Expression


Co-expression Network