G1964600


Basic Information

Item Value
gene id G1964600
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 23233020 ~ 23233510 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2246315
ggtcacaccagatacgtactggtaaaggtatctgtgactaacGGATGCACAtccgtattcccagtcatgtgaaatccatagattagggcctaattcatttatttcaattgactgatttccttatatgaactgtaactcagtaaaatcttttaaattgttgcgttttatatttttgttcagtatatgtggcGCTTTTCTACCTACTGAGGTACTCAAAGCACTTTACATACTAGGGggaaactcacctcatccaccaccCATGTGTAGCACCCACCAGGtagttttttattttcatttttttaaatgtaacctttatttaactaggcaactcagttaagaacaaattcttatttacaatgacggcctaccagggaatagtgggttaactgccttgttcaggggcagaacaacagatttttacattgtcagttCAGGAAttagatccagcaacctttcagttactggcccaatgctctagccactaggctacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2246315 True 491 lncRNA 0.39 1 23233020 23233510

Neighbor

gene id symbol gene type direction distance location
LOC110505636 LOC106610964 coding downstream 94860 23106379 ~ 23138160 (-)
LOC110504210 NA coding downstream 278071 22925846 ~ 22954949 (-)
LOC110504330 gphb5 coding downstream 339679 22892083 ~ 22893341 (-)
LOC110505631 LOC106610967 coding downstream 507015 22704448 ~ 22726005 (-)
LOC118944370 NA coding downstream 660544 22570272 ~ 22572476 (-)
brf1a LOC106610962 coding upstream 34034 23267544 ~ 23331891 (-)
LOC110505641 LOC106610961 coding upstream 110893 23344403 ~ 23354010 (-)
LOC110505642 klc1 coding upstream 124145 23357655 ~ 23393079 (-)
trmt61a trm61 coding upstream 209412 23442922 ~ 23456284 (-)
LOC110505645 LOC106610955 coding upstream 228725 23462235 ~ 23501934 (-)
G1964596 NA non-coding downstream 5642 23227173 ~ 23227378 (-)
G1964526 NA non-coding downstream 45348 23183295 ~ 23187672 (-)
G1964557 NA non-coding downstream 60835 23171991 ~ 23172185 (-)
G1964556 NA non-coding downstream 61342 23171291 ~ 23171678 (-)
G1964548 NA non-coding downstream 87469 23145187 ~ 23145551 (-)
G1964607 NA non-coding upstream 7521 23241031 ~ 23241251 (-)
G1964611 NA non-coding upstream 19079 23252589 ~ 23252845 (-)
G1964615 NA non-coding upstream 21327 23254837 ~ 23255044 (-)
G1964677 NA non-coding upstream 102673 23336183 ~ 23336386 (-)
G1964679 NA non-coding upstream 103996 23337506 ~ 23337741 (-)
G1964592 LOC106569888 other downstream 10517 23221973 ~ 23222503 (-)
G1964564 NA other downstream 64907 23165032 ~ 23168113 (-)
G1963846 NA other downstream 187316 23036891 ~ 23045704 (-)
G1962803 LOC106610988 other downstream 1136524 22095519 ~ 22096496 (-)
G1962524 LOC106610994 other downstream 1235450 21990844 ~ 21997570 (-)
G1964728 NA other upstream 192053 23425563 ~ 23428841 (-)
G1967882 NA other upstream 3301854 26535364 ~ 26538708 (-)
LOC110505716 LOC106024658 other upstream 3483174 26716542 ~ 26765410 (-)
G1969699 LOC100380709 other upstream 4866411 28099921 ~ 28101436 (-)
G1969724 NA other upstream 4909928 28143438 ~ 28143762 (-)

Expression


Co-expression Network