G1964055


Basic Information

Item Value
gene id G1964055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 23335796 ~ 23336014 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245689
GGGATCCCCAAAAAATCCAATAGGTATTTATTTGTTCAAAGTGTGGTTTACATTTCTGTATTGCTCTGACCTTTAAAACTGTAGTCCAAATTACCTGTGGGCTGTTTAAATTGGTGTTTTAACCCTAGGATGCATATGCTGTATTGGTTTCCCCCCCAAAAACCATATCAGCATCTAATATTCCAGGAATTCCTTAAATAACGTGTCTTTAAAGTTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245689 True 219 lncRNA 0.36 1 23335796 23336014

Neighbor

gene id symbol gene type direction distance location
LOC110505640 LOC106610963 coding upstream 20001 23308598 ~ 23315795 (+)
LOC110505634 2a5e coding upstream 469993 22793084 ~ 22865803 (+)
wdr89 wdr89 coding upstream 537741 22795476 ~ 22798055 (+)
LOC110504209 NA coding upstream 555756 22770562 ~ 22780040 (+)
LOC110504329 LOC105895945 coding upstream 567431 22764658 ~ 22768365 (+)
LOC110505643 LOC106610958 coding downstream 73345 23409359 ~ 23421308 (+)
LOC110505646 kcrt coding downstream 121644 23457658 ~ 23462167 (+)
LOC110505647 NA coding downstream 172021 23508035 ~ 23518659 (+)
LOC110505653 LOC106610949 coding downstream 360459 23696473 ~ 23704474 (+)
hao1 hao1 coding downstream 368650 23704664 ~ 23707351 (+)
G1964046 NA non-coding upstream 13549 23320716 ~ 23322247 (+)
G1964001 LOC106609167 non-coding upstream 82249 23253326 ~ 23253547 (+)
G1963999 NA non-coding upstream 84051 23251358 ~ 23251745 (+)
G1963981 NA non-coding upstream 113287 23222205 ~ 23222509 (+)
G1963948 NA non-coding upstream 161559 23174030 ~ 23174237 (+)
G1964059 NA non-coding downstream 3014 23339028 ~ 23339433 (+)
G1964060 NA non-coding downstream 4702 23340716 ~ 23340915 (+)
G1964087 NA non-coding downstream 58110 23394124 ~ 23394367 (+)
G1964088 NA non-coding downstream 58661 23394675 ~ 23394916 (+)
G1964093 NA non-coding downstream 66657 23402671 ~ 23402915 (+)
G1963734 NA other upstream 417110 22917946 ~ 22918686 (+)
G1962949 NA other upstream 942840 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 1024995 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 1061133 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 1467763 21838453 ~ 21886964 (+)
G1964177 NA other downstream 269920 23605934 ~ 23613765 (+)
G1964499 NA other downstream 740507 24076521 ~ 24076721 (+)
G1965262 NA other downstream 1024423 24360437 ~ 24360985 (+)
G1965263 NA other downstream 1025074 24361088 ~ 24361482 (+)
G1965396 NA other downstream 1229717 24565731 ~ 24567147 (+)

Expression


Co-expression Network