Gene
RNA
| Item | Value |
|---|---|
| gene id | G1964688 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 23354315 ~ 23354541 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109086197 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2246417 | True | 227 | lncRNA | 0.41 | 1 | 23354315 | 23354541 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505641 | LOC106610961 | coding | downstream | 305 | 23344403 ~ 23354010 (-) |
| brf1a | LOC106610962 | coding | downstream | 22424 | 23267544 ~ 23331891 (-) |
| LOC110505636 | LOC106610964 | coding | downstream | 216155 | 23106379 ~ 23138160 (-) |
| LOC110504210 | NA | coding | downstream | 399366 | 22925846 ~ 22954949 (-) |
| LOC110504330 | gphb5 | coding | downstream | 460974 | 22892083 ~ 22893341 (-) |
| LOC110505642 | klc1 | coding | upstream | 3114 | 23357655 ~ 23393079 (-) |
| trmt61a | trm61 | coding | upstream | 88381 | 23442922 ~ 23456284 (-) |
| LOC110505645 | LOC106610955 | coding | upstream | 107694 | 23462235 ~ 23501934 (-) |
| if5 | if5 | coding | upstream | 148293 | 23502834 ~ 23509400 (-) |
| LOC100136135 | LOC106610954 | coding | upstream | 164869 | 23519410 ~ 23527200 (-) |
| G1964682 | NA | non-coding | downstream | 14476 | 23339626 ~ 23339839 (-) |
| G1964681 | NA | non-coding | downstream | 14983 | 23339073 ~ 23339332 (-) |
| G1964679 | NA | non-coding | downstream | 16574 | 23337506 ~ 23337741 (-) |
| G1964677 | NA | non-coding | downstream | 17929 | 23336183 ~ 23336386 (-) |
| G1964615 | NA | non-coding | downstream | 99271 | 23254837 ~ 23255044 (-) |
| G1964689 | NA | non-coding | upstream | 685 | 23355226 ~ 23355573 (-) |
| G1964690 | NA | non-coding | upstream | 1302 | 23355843 ~ 23356135 (-) |
| G1964706 | NA | non-coding | upstream | 39484 | 23394025 ~ 23394244 (-) |
| G1964713 | NA | non-coding | upstream | 49469 | 23404010 ~ 23404270 (-) |
| G1964722 | NA | non-coding | upstream | 59802 | 23414343 ~ 23414572 (-) |
| G1964592 | LOC106569888 | other | downstream | 131812 | 23221973 ~ 23222503 (-) |
| G1964564 | NA | other | downstream | 186202 | 23165032 ~ 23168113 (-) |
| G1963846 | NA | other | downstream | 308611 | 23036891 ~ 23045704 (-) |
| G1962803 | LOC106610988 | other | downstream | 1257819 | 22095519 ~ 22096496 (-) |
| G1962524 | LOC106610994 | other | downstream | 1356745 | 21990844 ~ 21997570 (-) |
| G1964728 | NA | other | upstream | 71022 | 23425563 ~ 23428841 (-) |
| G1967882 | NA | other | upstream | 3180823 | 26535364 ~ 26538708 (-) |
| LOC110505716 | LOC106024658 | other | upstream | 3362143 | 26716542 ~ 26765410 (-) |
| G1969699 | LOC100380709 | other | upstream | 4745380 | 28099921 ~ 28101436 (-) |
| G1969724 | NA | other | upstream | 4788897 | 28143438 ~ 28143762 (-) |
