Gene
RNA
| Item | Value |
|---|---|
| gene id | G1964689 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 23355226 ~ 23355573 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2246418 | True | 348 | lncRNA | 0.35 | 1 | 23355226 | 23355573 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505641 | LOC106610961 | coding | downstream | 1216 | 23344403 ~ 23354010 (-) |
| brf1a | LOC106610962 | coding | downstream | 23335 | 23267544 ~ 23331891 (-) |
| LOC110505636 | LOC106610964 | coding | downstream | 217066 | 23106379 ~ 23138160 (-) |
| LOC110504210 | NA | coding | downstream | 400277 | 22925846 ~ 22954949 (-) |
| LOC110504330 | gphb5 | coding | downstream | 461885 | 22892083 ~ 22893341 (-) |
| LOC110505642 | klc1 | coding | upstream | 2082 | 23357655 ~ 23393079 (-) |
| trmt61a | trm61 | coding | upstream | 87349 | 23442922 ~ 23456284 (-) |
| LOC110505645 | LOC106610955 | coding | upstream | 106662 | 23462235 ~ 23501934 (-) |
| if5 | if5 | coding | upstream | 147261 | 23502834 ~ 23509400 (-) |
| LOC100136135 | LOC106610954 | coding | upstream | 163837 | 23519410 ~ 23527200 (-) |
| G1964688 | NA | non-coding | downstream | 685 | 23354315 ~ 23354541 (-) |
| G1964682 | NA | non-coding | downstream | 15387 | 23339626 ~ 23339839 (-) |
| G1964681 | NA | non-coding | downstream | 15894 | 23339073 ~ 23339332 (-) |
| G1964679 | NA | non-coding | downstream | 17485 | 23337506 ~ 23337741 (-) |
| G1964677 | NA | non-coding | downstream | 18840 | 23336183 ~ 23336386 (-) |
| G1964690 | NA | non-coding | upstream | 270 | 23355843 ~ 23356135 (-) |
| G1964706 | NA | non-coding | upstream | 38452 | 23394025 ~ 23394244 (-) |
| G1964713 | NA | non-coding | upstream | 48437 | 23404010 ~ 23404270 (-) |
| G1964722 | NA | non-coding | upstream | 58770 | 23414343 ~ 23414572 (-) |
| G1964726 | LOC106610958 | non-coding | upstream | 64399 | 23419972 ~ 23424061 (-) |
| G1964592 | LOC106569888 | other | downstream | 132723 | 23221973 ~ 23222503 (-) |
| G1964564 | NA | other | downstream | 187113 | 23165032 ~ 23168113 (-) |
| G1963846 | NA | other | downstream | 309522 | 23036891 ~ 23045704 (-) |
| G1962803 | LOC106610988 | other | downstream | 1258730 | 22095519 ~ 22096496 (-) |
| G1962524 | LOC106610994 | other | downstream | 1357656 | 21990844 ~ 21997570 (-) |
| G1964728 | NA | other | upstream | 69990 | 23425563 ~ 23428841 (-) |
| G1967882 | NA | other | upstream | 3179791 | 26535364 ~ 26538708 (-) |
| LOC110505716 | LOC106024658 | other | upstream | 3361111 | 26716542 ~ 26765410 (-) |
| G1969699 | LOC100380709 | other | upstream | 4744348 | 28099921 ~ 28101436 (-) |
| G1969724 | NA | other | upstream | 4787865 | 28143438 ~ 28143762 (-) |
