G1964087


Basic Information

Item Value
gene id G1964087
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 23394124 ~ 23394367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245726
tttgagtgtttgttgcagctcgttccagtcactagctgcagcgaactgaaaagacgagtgacccagggacgtgtgtgctttggggacctttaacagaatgtgactagcagaacaggtgttgtatgtggaggatgagggctgtagtcgatatctcagataggggagagtgaggcctaagagggttttataaataagcatgaaccagtgggtcttgcgacgggtatacagagatgaccagtttaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245726 True 244 lncRNA 0.48 1 23394124 23394367

Neighbor

gene id symbol gene type direction distance location
LOC110505640 LOC106610963 coding upstream 78329 23308598 ~ 23315795 (+)
LOC110505634 2a5e coding upstream 528321 22793084 ~ 22865803 (+)
wdr89 wdr89 coding upstream 596069 22795476 ~ 22798055 (+)
LOC110504209 NA coding upstream 614084 22770562 ~ 22780040 (+)
LOC110504329 LOC105895945 coding upstream 625759 22764658 ~ 22768365 (+)
LOC110505643 LOC106610958 coding downstream 14992 23409359 ~ 23421308 (+)
LOC110505646 kcrt coding downstream 63291 23457658 ~ 23462167 (+)
LOC110505647 NA coding downstream 113668 23508035 ~ 23518659 (+)
LOC110505653 LOC106610949 coding downstream 302106 23696473 ~ 23704474 (+)
hao1 hao1 coding downstream 310297 23704664 ~ 23707351 (+)
G1964060 NA non-coding upstream 53209 23340716 ~ 23340915 (+)
G1964059 NA non-coding upstream 54691 23339028 ~ 23339433 (+)
G1964055 NA non-coding upstream 58110 23335796 ~ 23336014 (+)
G1964046 NA non-coding upstream 71877 23320716 ~ 23322247 (+)
G1964001 LOC106609167 non-coding upstream 140577 23253326 ~ 23253547 (+)
G1964088 NA non-coding downstream 308 23394675 ~ 23394916 (+)
G1964093 NA non-coding downstream 8304 23402671 ~ 23402915 (+)
G1964040 NA non-coding downstream 33608 23427975 ~ 23428745 (+)
G1964108 NA non-coding downstream 34491 23428858 ~ 23429133 (+)
G1964112 NA non-coding downstream 39146 23433513 ~ 23434261 (+)
G1963734 NA other upstream 475438 22917946 ~ 22918686 (+)
G1962949 NA other upstream 1001168 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 1083323 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 1119461 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 1526091 21838453 ~ 21886964 (+)
G1964177 NA other downstream 211567 23605934 ~ 23613765 (+)
G1964499 NA other downstream 682154 24076521 ~ 24076721 (+)
G1965262 NA other downstream 966070 24360437 ~ 24360985 (+)
G1965263 NA other downstream 966721 24361088 ~ 24361482 (+)
G1965396 NA other downstream 1171364 24565731 ~ 24567147 (+)

Expression


Co-expression Network