Gene
RNA
| Item | Value |
|---|---|
| gene id | G1964116 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 23440187 ~ 23440494 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2245759 | True | 308 | lncRNA | 0.33 | 1 | 23440187 | 23440494 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505643 | LOC106610958 | coding | upstream | 18879 | 23409359 ~ 23421308 (+) |
| LOC110505640 | LOC106610963 | coding | upstream | 124392 | 23308598 ~ 23315795 (+) |
| LOC110505634 | 2a5e | coding | upstream | 574384 | 22793084 ~ 22865803 (+) |
| wdr89 | wdr89 | coding | upstream | 642132 | 22795476 ~ 22798055 (+) |
| LOC110504209 | NA | coding | upstream | 660147 | 22770562 ~ 22780040 (+) |
| LOC110505646 | kcrt | coding | downstream | 17164 | 23457658 ~ 23462167 (+) |
| LOC110505647 | NA | coding | downstream | 67541 | 23508035 ~ 23518659 (+) |
| LOC110505653 | LOC106610949 | coding | downstream | 255979 | 23696473 ~ 23704474 (+) |
| hao1 | hao1 | coding | downstream | 264170 | 23704664 ~ 23707351 (+) |
| napba | LOC106610947 | coding | downstream | 277997 | 23718491 ~ 23725669 (+) |
| G1964112 | NA | non-coding | upstream | 5926 | 23433513 ~ 23434261 (+) |
| G1964108 | NA | non-coding | upstream | 11054 | 23428858 ~ 23429133 (+) |
| G1964040 | NA | non-coding | upstream | 11442 | 23427975 ~ 23428745 (+) |
| G1964093 | NA | non-coding | upstream | 37272 | 23402671 ~ 23402915 (+) |
| G1964088 | NA | non-coding | upstream | 45271 | 23394675 ~ 23394916 (+) |
| G1964104 | NA | non-coding | downstream | 65040 | 23505534 ~ 23506164 (+) |
| G1964098 | LOC106610956 | non-coding | downstream | 66539 | 23507033 ~ 23507979 (+) |
| G1964197 | LOC106561506 | non-coding | downstream | 119512 | 23560006 ~ 23560391 (+) |
| G1964204 | NA | non-coding | downstream | 126972 | 23567466 ~ 23567682 (+) |
| G1964226 | NA | non-coding | downstream | 155471 | 23595965 ~ 23596347 (+) |
| G1963734 | NA | other | upstream | 521501 | 22917946 ~ 22918686 (+) |
| G1962949 | NA | other | upstream | 1047231 | 22392591 ~ 22392956 (+) |
| lrrc9 | LOC106610979 | other | upstream | 1129386 | 22297012 ~ 22318009 (+) |
| G1962880 | rtn1 | other | upstream | 1165524 | 22250058 ~ 22274663 (+) |
| LOC110505603 | LOC106610998 | other | upstream | 1572154 | 21838453 ~ 21886964 (+) |
| G1964177 | NA | other | downstream | 165440 | 23605934 ~ 23613765 (+) |
| G1964499 | NA | other | downstream | 636027 | 24076521 ~ 24076721 (+) |
| G1965262 | NA | other | downstream | 919943 | 24360437 ~ 24360985 (+) |
| G1965263 | NA | other | downstream | 920594 | 24361088 ~ 24361482 (+) |
| G1965396 | NA | other | downstream | 1125237 | 24565731 ~ 24567147 (+) |
