G1964177


Basic Information

Item Value
gene id G1964177
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 23605934 ~ 23613765 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245829
TGCAGAATAAGGCAATAGCAACAATCAAAATAAGGCAATATAAATGAATAAATCAACTATTTACATAGGTGTTAAAATGTTTCTACTTTGCacaaattcagaaaacaaaatcTATTAGTTTTACATTATGGCAAATCAAAACTAGGCATCATTATGATCAAAATATAGTTGCATCAATATATATTTTCTGCTTTTTACTGTGATTACAAGCATTCAATTTTAGCATCATGTATTTCATGGTATTAAGTGTACAGATTTGAATAGTTccttatatgtgttctgtttttGTTCTATGAATGTTGCATGGTTTGTATGTATATCATTACGTATTCATTTTTTCAGACTCATGATCATTTATACCTTATATCTATATATGCCTGCCCAGAAGTCGAATAAAGAGCAGACATCAGAGATCATTCATAAATGCATATGGCAGTGGATTAACAAGTTCCTCTTCATTATATGTACAGCATAACAATTTGCAGAGATGTCTAAAAACAGCAATGGTCTCAGTGGTGTacaattccatggtaacagagtGACACTGAGACTCAGATATTTTACTTTAAAATGTGTGTCAAACCAAAatcaatgattgcaaagttaaacaaaccatacaactctatgcacaatgactacttttaaAGCTGCATTacgtaactttttgggcaacGGGACTAAAATTCCTTTCTTTGAAAgcaagaagtggtagatctgttctatgtgcgctatttctatgcttccagtTCTTACGTTTCGTTTTTGCGTCTTATATTtccagttttgtacaccagcttcaaacagctgaaaatgctCTATTTTTAGTTAtggaaatatatttcacagtggtttagatggtacaatgattctctacactctacatgcttgttttgtcacataaactgaaattaggcaaactattacaaTTTCTGCAAACAAGGAAACAACCACCAAAAATGCTGGTAACAGAATGAGGCACAAActctcattctgttaccaaactttgcatttgcactgttcttcaagtaaatgtatttttgtaaaatgttctgaTTTTATGCGAAGAAAGTAGCCtatgtcagataaaaaaaaatcacaacagaCCTGATGGAAACAGCACATTTGTCAGtaaatgtattttttgggggaGAAAACTAAATaagctagacaaggtgggatcattttgtgtcagtaaaattaattatgcgagaaatggtggtggaaatgcttttatgtgcaaatatttacagtatataaAAACCATCATATTGAAGTCAATTGGAGTCACATGATGCTGCAACTCAGGGGTAGACCTAACATCGTAAATGTATATCCGATACAtatcatacaatatgttacgaatttgcaaaaggtatgatatgttaagaattccaatttgttgtggctaatgttagctaggtggttGATGTTAgctagactaggggttagggattaagggttatggttaggagttaggttaaagggttaaggttagggaaggGTTAGTTATCATGCTAAGTAGTAGCAAAGTTGCTCACAAGTAGTAAGTAGTTACAAAGTTGATAATTAGCTCAAATGCAAACGTTGTCCATGATAAGATTCAAACAGACAACCTTTCGGTTGCTAGACTTTCCTGTTATACACCCACCCCGACCAGCCACCTTACATTTATTTTTGCTTTatgtaaccttctgtcttatgtaaccataccaaactgATTTGTATGTTGTAATTgcgtttactatgttatgtctagtctatgagaccaggctgaatgCTATTGTGTGGTCCACCCACTATGACTTTGGAAGAGGCAAGTCACCCCAATAGATGTCAGTATTGGATGACCATTCATGTCTGAGGAAGTTGGGAGATGATGTGTATTTGCCAAAGGTTTCATGTTCGAATCCAGCGaaagaaagttgtttttgatatttttgttttatgcCTGTCCCAAatccttaacctttaccttaaacATTTGGAGTTAATGTCTAACTTTAATAATTCTGAGTTAATGCATAAACTTAAAGAAAAATTCCACCCGGAAAcgatcttttggtatttgtttcattagttcattgttgacatagtcccaaaatgttttgcttgtctgcaatcaagttttcaaaatatgtaactttcaaaatatagaaatcaTCCCTGTATGCTGCAAATTGCATCATACGGGGATGATTTATGTATTTTGAAAATGACATATTTTTAAAACTTGATTGCATATTTTCTTTATGCAGATTTTTGAATATtcccaattggatggaaacctagctgctgtcactctgttactgtggaattgaCCTGGTCTCAGCGGAAGTAATTACATTGACAAAGTTGGCTTTTACAACGCTACCTGTATCATGGGGCTTGTATGCCAATTTGTGTACTTATATAGTGTACTAGGTAAACACTCAAAACATTGAACTGTATATATTAAAACTTGGTCATAAGTGAAAGCACAATTAATAAGAGCACAATAATAATCTGACTGATATTACTCCTCAATGGAGGGATTTATCATACTGTATTCCTCCCAGTCACTCCAATTCAGCCCCATCAAAAAATGTCATTTTCTCAGACTGCATAGTGTCTTTTATCTGTTTGATAGATGAGGCTGTTTCATCTGAGATGGGCTCAGCCACAAACACATGTGTAATTTTTTGGGTTATGAAAACCGTTTCCTTGTCAGTGCCTGACATTTCCCTAACTACATGCCTCTCAATAACTGTTTGCCCATCActctgtgttttgttggtgtCGTCCACTGACCAAGATGCAGAAGAAACTCCGGCGGTCCCTGTCTGCAATCCAAAATCTGTTAAGAGTGTGGCCTTCTGTGTGTCTGGTATTGCTTGTATGGATGTGCTGACATGTGTACCAGACTCCAATTTTAGGGTGTCCACTGATGAGGAGGAAACTCCGGAGGACATTGGAATGGTGACTTTATCTGCCAAGTAGGGTTCAAAGGCAATACATTTTGTCCTTGCTGTGGAGGTGATGACATCACCCTGAACCTCAGTGGCAATAGGGTCAGAATATTTCACTGTGACTTTGGTTGGAGAGGCCAATGGTGGACCAAATTGTTCGCTTGTGACTGTTGAACTAATATCTGCAAAAGCATCTGATGAGTGTACTGAAAAGGTCAAGCTGGCGTCCTGTTCCACAGAGTCAGGGCTTTTCTCACTTCCTCCTTTCTCAGAAGTGTCTTTTTCTAAAATCTTGGCAGATTCTGAAGGAGAAGATAGTCCAAATGTGGGAAACTTAACCCACCCAAATTTAGATTTTTCTTTGGCTTCTTCCTCTTTATGCACAGACTGGGTTTCAACACTGGTTTGAGCATTTAGTTCGGTTTTCCCTGAGGATGTTATATCTTCCCTTGAGCCTGTGAGCTTCTCTTCCACTTCCTCTAATTTGGGAACATCAAATTCAACATCAATGCTTCTTAATATCTCCCCAAATGTTGTCAAAGTCAACTTTGGTGATTTCTCTGGTCCTTGTGGTTTTACTTGAATCTCATAATTCTCCAAAATAACATTTGGATTTATATCATCATGTTCATTCTCAGGTTTGGATTTTGAAATGCTCAATCTGGGCATTTTAAAGGTCGGAAGTTTGAATTTACTAGGTGAGCCTTGACCTTTGCTGGGGGAACCATGGCCTTTATCATCAATTGTCAGTTTTGAAACTTCAACTTCATGAACATACACTTCGGCTATTGCCATTCCACCTTTAACTGAGGGCCTTTCAGATCCAGCATCATGTAGCTGTACTTCTCTAGATCCTTTAATGTCAACTGTGTCCCCGTGTTCGGGTAAATCAATTTCAATAATTTCTACCCCAGGCACTTTAATATCCTTCTCTGTATCAGAGACATCGACTACAACCTTTGACGTTGCGCCAAATTTAGGGAATTTGAATGTTGCCATTTTGAATCCCATCTCTGATGTTTCTAGTTTTCTATCAACTGATACATCTTCATGTTTCATTTCAACTTGACTCTCCGGAGCTTTCATTTCCACCTCAGGCTCTTTGACCTCCACATTTCCCTCTGAAAGCGAAATGTCCACCTTTGGACGACTGACATCAATCTCAGGTGGTTTCACTTCTGGTTTGGAAAACAATCCAAATGACATCTGTGGTATTTTCATTTTCACATCAATTCCTGTAGCAGCTCCATCGGGCATTTCAATTTCACCAGAAGGCACTTCGATATCAACATCAGGTTGTTGGACCTCCACTTGGTCCCCTGGTAAAGTGACATCTATGACTTTCTTTGATACACTGAAATCCATCTCAGGACCTTTTACCTTTGGCAATGAGATTCCAAATTTGGGTAGTTTGAACTTACTTCCTTGTCCCTCAAGCTCAATAGCATGTTTCACTTCAACTTGAATCTCTGGAGCTGTCATTTCCACCTCAGGCTCTTTGACCTCCACTTTTCCCTCTGGAAGAGAAATATCCACCTCTGGAAGACTGACATCAACCTCAGGTGATTTCACTTCTGGTTTTGAAAACCATCCAAATGACATCCGTGGCTTTTTCATTTTCACATCAATTTCTGTAGCAGCTCCCTCAGGCATTTCAACTTCACCAGAAGACACTTTGAGTTCAATTCTAGGTGGTTGGACCTCCACGCTGGCCTCTGGTAAAGTGACAATTTCAAGTGTTTTACTCTTCACATCCACATCTATATATGGGCCTTTAAGGTCAACACTTGGCTTTTCAATGTTAATTGTTGACATTGTCGGTTTGAGTTCTGGAATTTCAGATCCATGAACCTTGATGTCCTTGTCCACATCAGGTACCTCTACTGTGATGTTTGGAGCTGCTGCTCCAAATTGAGGGAATTTTAAAGTTGGCATTTTGAATCTTGAGGGGGAGCCTACGGTATCTTTCACCTCAATTTGAATCTCTGGAGCTTCAATTTCCATCTCAGGCTCTTTGACCTCCACATTTTCTTCTGGAACAGAAATATCCACCTCTGGAAGACTGACATCAACCTTGGGTGCTTTAACTTCTGGTTTTGAAAATCCAAATTTGGGGAAAGACATTCTGGGTATTTTCATTTTCAC

Function

NR:

description
protein AHNAK2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245829 True 5090 TUCP 0.38 3 23605934 23613765

Neighbor

gene id symbol gene type direction distance location
LOC110505647 NA coding upstream 87275 23508035 ~ 23518659 (+)
LOC110505646 kcrt coding upstream 143767 23457658 ~ 23462167 (+)
LOC110505643 LOC106610958 coding upstream 184626 23409359 ~ 23421308 (+)
LOC110505640 LOC106610963 coding upstream 290139 23308598 ~ 23315795 (+)
LOC110505634 2a5e coding upstream 740131 22793084 ~ 22865803 (+)
LOC110505653 LOC106610949 coding downstream 82708 23696473 ~ 23704474 (+)
hao1 hao1 coding downstream 90899 23704664 ~ 23707351 (+)
napba LOC106610947 coding downstream 104726 23718491 ~ 23725669 (+)
LOC110505657 cdc5l coding downstream 123983 23737748 ~ 23746326 (+)
LOC110504213 NA coding downstream 143218 23756983 ~ 23761303 (+)
G1964226 NA non-coding upstream 9587 23595965 ~ 23596347 (+)
G1964204 NA non-coding upstream 38252 23567466 ~ 23567682 (+)
G1964197 LOC106561506 non-coding upstream 45543 23560006 ~ 23560391 (+)
G1964098 LOC106610956 non-coding upstream 97955 23507033 ~ 23507979 (+)
G1964104 NA non-coding upstream 99770 23505534 ~ 23506164 (+)
G1964278 NA non-coding downstream 114692 23728457 ~ 23728696 (+)
G1964288 NA non-coding downstream 146504 23760269 ~ 23760488 (+)
G1964301 NA non-coding downstream 167430 23781195 ~ 23781699 (+)
G1964302 NA non-coding downstream 168674 23782439 ~ 23782885 (+)
G1964303 NA non-coding downstream 172603 23786368 ~ 23786579 (+)
G1963734 NA other upstream 687248 22917946 ~ 22918686 (+)
G1962949 NA other upstream 1212978 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 1295133 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 1331271 22250058 ~ 22274663 (+)
LOC110505603 LOC106610998 other upstream 1737901 21838453 ~ 21886964 (+)
G1964499 NA other downstream 462756 24076521 ~ 24076721 (+)
G1965262 NA other downstream 746672 24360437 ~ 24360985 (+)
G1965263 NA other downstream 747323 24361088 ~ 24361482 (+)
G1965396 NA other downstream 951966 24565731 ~ 24567147 (+)
LOC110505697 ypel5 other downstream 1175362 24788926 ~ 24791594 (+)

Expression


Co-expression Network