G1964301


Basic Information

Item Value
gene id G1964301
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 23781195 ~ 23781699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2245974
ttatatacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatgtttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgccggatttggatacaaaaagatttcccaagctttaaacattccaaggagcactgtgcaagcgataat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2245974 True 505 lncRNA 0.39 1 23781195 23781699

Neighbor

gene id symbol gene type direction distance location
LOC110504213 NA coding upstream 19892 23756983 ~ 23761303 (+)
LOC110505657 cdc5l coding upstream 34869 23737748 ~ 23746326 (+)
napba LOC106610947 coding upstream 55526 23718491 ~ 23725669 (+)
hao1 hao1 coding upstream 73844 23704664 ~ 23707351 (+)
LOC110505653 LOC106610949 coding upstream 76721 23696473 ~ 23704474 (+)
LOC110505665 ampm1 coding downstream 191197 23972896 ~ 23991462 (+)
enpep LOC106610934 coding downstream 251183 24032882 ~ 24058913 (+)
LOC110505673 NA coding downstream 297022 24078721 ~ 24080745 (+)
LOC110505676 LOC106610929 coding downstream 453579 24235278 ~ 24289662 (+)
LOC110505678 LOC106611137 coding downstream 531775 24313474 ~ 24355303 (+)
G1964288 NA non-coding upstream 20707 23760269 ~ 23760488 (+)
G1964278 NA non-coding upstream 52499 23728457 ~ 23728696 (+)
G1964226 NA non-coding upstream 184848 23595965 ~ 23596347 (+)
G1964204 NA non-coding upstream 213513 23567466 ~ 23567682 (+)
G1964197 LOC106561506 non-coding upstream 220804 23560006 ~ 23560391 (+)
G1964302 NA non-coding downstream 740 23782439 ~ 23782885 (+)
G1964303 NA non-coding downstream 4669 23786368 ~ 23786579 (+)
G1964290 LOC106610943 non-coding downstream 5659 23787358 ~ 23791749 (+)
G1964309 LOC106610942 non-coding downstream 22785 23804484 ~ 23805220 (+)
G1964377 NA non-coding downstream 101583 23883282 ~ 23951945 (+)
G1964177 NA other upstream 167430 23605934 ~ 23613765 (+)
G1963734 NA other upstream 862509 22917946 ~ 22918686 (+)
G1962949 NA other upstream 1388239 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 1470394 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 1506532 22250058 ~ 22274663 (+)
G1964499 NA other downstream 294822 24076521 ~ 24076721 (+)
G1965262 NA other downstream 578738 24360437 ~ 24360985 (+)
G1965263 NA other downstream 579389 24361088 ~ 24361482 (+)
G1965396 NA other downstream 784032 24565731 ~ 24567147 (+)
LOC110505697 ypel5 other downstream 1007428 24788926 ~ 24791594 (+)

Expression


Co-expression Network