Gene
RNA
| Item | Value |
|---|---|
| gene id | G1964442 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 23993329 ~ 23993603 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2246139 | True | 275 | lncRNA | 0.40 | 1 | 23993329 | 23993603 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505665 | ampm1 | coding | upstream | 1867 | 23972896 ~ 23991462 (+) |
| LOC110504213 | NA | coding | upstream | 232026 | 23756983 ~ 23761303 (+) |
| LOC110505657 | cdc5l | coding | upstream | 247003 | 23737748 ~ 23746326 (+) |
| napba | LOC106610947 | coding | upstream | 267660 | 23718491 ~ 23725669 (+) |
| hao1 | hao1 | coding | upstream | 285978 | 23704664 ~ 23707351 (+) |
| enpep | LOC106610934 | coding | downstream | 39279 | 24032882 ~ 24058913 (+) |
| LOC110505673 | NA | coding | downstream | 85118 | 24078721 ~ 24080745 (+) |
| LOC110505676 | LOC106610929 | coding | downstream | 241675 | 24235278 ~ 24289662 (+) |
| LOC110505678 | LOC106611137 | coding | downstream | 319871 | 24313474 ~ 24355303 (+) |
| zgc:123321 | yipf5 | coding | downstream | 382224 | 24375827 ~ 24378263 (+) |
| G1964385 | NA | non-coding | upstream | 29661 | 23892004 ~ 23963668 (+) |
| G1964377 | NA | non-coding | upstream | 41384 | 23883282 ~ 23951945 (+) |
| G1964309 | LOC106610942 | non-coding | upstream | 188109 | 23804484 ~ 23805220 (+) |
| G1964290 | LOC106610943 | non-coding | upstream | 201580 | 23787358 ~ 23791749 (+) |
| G1964303 | NA | non-coding | upstream | 206750 | 23786368 ~ 23786579 (+) |
| G1964443 | NA | non-coding | downstream | 402 | 23994005 ~ 23994253 (+) |
| G1964445 | NA | non-coding | downstream | 1548 | 23995151 ~ 23995555 (+) |
| G1964467 | NA | non-coding | downstream | 26324 | 24019927 ~ 24020152 (+) |
| G1964468 | NA | non-coding | downstream | 26638 | 24020241 ~ 24020560 (+) |
| G1964489 | LOC106610933 | non-coding | downstream | 56993 | 24050596 ~ 24068616 (+) |
| G1964177 | NA | other | upstream | 379564 | 23605934 ~ 23613765 (+) |
| G1963734 | NA | other | upstream | 1074643 | 22917946 ~ 22918686 (+) |
| G1962949 | NA | other | upstream | 1600373 | 22392591 ~ 22392956 (+) |
| lrrc9 | LOC106610979 | other | upstream | 1682528 | 22297012 ~ 22318009 (+) |
| G1962880 | rtn1 | other | upstream | 1718666 | 22250058 ~ 22274663 (+) |
| G1964499 | NA | other | downstream | 82918 | 24076521 ~ 24076721 (+) |
| G1965262 | NA | other | downstream | 366834 | 24360437 ~ 24360985 (+) |
| G1965263 | NA | other | downstream | 367485 | 24361088 ~ 24361482 (+) |
| G1965396 | NA | other | downstream | 572128 | 24565731 ~ 24567147 (+) |
| LOC110505697 | ypel5 | other | downstream | 795524 | 24788926 ~ 24791594 (+) |
