G1964443


Basic Information

Item Value
gene id G1964443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 23994005 ~ 23994253 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2246140
CCTGGTTTGAATTTTGTGATACCATCTTCAACGCTTTCCATCGTCCCAGCACCTTCACGACAGGGAAACCCCCCTCTGGGTTTGAGCCACTCAGTGTTCAGGAATCTGTATGGCAGATCCCAGAGGCAACCATTTGCAACACATTCAGGGTATTTTAATTCGGCCAATTTAGGAGATGATTCAACTTTACCATTGTCCACTTAGGTAATTACAATAACCAGTGTTTTCAAGGGCAATCATGAAACCACC

Function

NR:

description
Alcohol dehydrogenase class 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2246140 True 249 lncRNA 0.45 1 23994005 23994253

Neighbor

gene id symbol gene type direction distance location
LOC110505665 ampm1 coding upstream 2543 23972896 ~ 23991462 (+)
LOC110504213 NA coding upstream 232702 23756983 ~ 23761303 (+)
LOC110505657 cdc5l coding upstream 247679 23737748 ~ 23746326 (+)
napba LOC106610947 coding upstream 268336 23718491 ~ 23725669 (+)
hao1 hao1 coding upstream 286654 23704664 ~ 23707351 (+)
enpep LOC106610934 coding downstream 38629 24032882 ~ 24058913 (+)
LOC110505673 NA coding downstream 84468 24078721 ~ 24080745 (+)
LOC110505676 LOC106610929 coding downstream 241025 24235278 ~ 24289662 (+)
LOC110505678 LOC106611137 coding downstream 319221 24313474 ~ 24355303 (+)
zgc:123321 yipf5 coding downstream 381574 24375827 ~ 24378263 (+)
G1964442 NA non-coding upstream 402 23993329 ~ 23993603 (+)
G1964385 NA non-coding upstream 30337 23892004 ~ 23963668 (+)
G1964377 NA non-coding upstream 42060 23883282 ~ 23951945 (+)
G1964309 LOC106610942 non-coding upstream 188785 23804484 ~ 23805220 (+)
G1964290 LOC106610943 non-coding upstream 202256 23787358 ~ 23791749 (+)
G1964445 NA non-coding downstream 898 23995151 ~ 23995555 (+)
G1964467 NA non-coding downstream 25674 24019927 ~ 24020152 (+)
G1964468 NA non-coding downstream 25988 24020241 ~ 24020560 (+)
G1964489 LOC106610933 non-coding downstream 56343 24050596 ~ 24068616 (+)
G1964501 NA non-coding downstream 93013 24087266 ~ 24087467 (+)
G1964177 NA other upstream 380240 23605934 ~ 23613765 (+)
G1963734 NA other upstream 1075319 22917946 ~ 22918686 (+)
G1962949 NA other upstream 1601049 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 1683204 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 1719342 22250058 ~ 22274663 (+)
G1964499 NA other downstream 82268 24076521 ~ 24076721 (+)
G1965262 NA other downstream 366184 24360437 ~ 24360985 (+)
G1965263 NA other downstream 366835 24361088 ~ 24361482 (+)
G1965396 NA other downstream 571478 24565731 ~ 24567147 (+)
LOC110505697 ypel5 other downstream 794874 24788926 ~ 24791594 (+)

Expression


Co-expression Network