Gene
RNA
| Item | Value |
|---|---|
| gene id | G1964445 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 23995151 ~ 23995555 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2246142 | True | 405 | lncRNA | 0.40 | 1 | 23995151 | 23995555 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505665 | ampm1 | coding | upstream | 3689 | 23972896 ~ 23991462 (+) |
| LOC110504213 | NA | coding | upstream | 233848 | 23756983 ~ 23761303 (+) |
| LOC110505657 | cdc5l | coding | upstream | 248825 | 23737748 ~ 23746326 (+) |
| napba | LOC106610947 | coding | upstream | 269482 | 23718491 ~ 23725669 (+) |
| hao1 | hao1 | coding | upstream | 287800 | 23704664 ~ 23707351 (+) |
| enpep | LOC106610934 | coding | downstream | 37327 | 24032882 ~ 24058913 (+) |
| LOC110505673 | NA | coding | downstream | 83166 | 24078721 ~ 24080745 (+) |
| LOC110505676 | LOC106610929 | coding | downstream | 239723 | 24235278 ~ 24289662 (+) |
| LOC110505678 | LOC106611137 | coding | downstream | 317919 | 24313474 ~ 24355303 (+) |
| zgc:123321 | yipf5 | coding | downstream | 380272 | 24375827 ~ 24378263 (+) |
| G1964443 | NA | non-coding | upstream | 898 | 23994005 ~ 23994253 (+) |
| G1964442 | NA | non-coding | upstream | 1548 | 23993329 ~ 23993603 (+) |
| G1964385 | NA | non-coding | upstream | 31483 | 23892004 ~ 23963668 (+) |
| G1964377 | NA | non-coding | upstream | 43206 | 23883282 ~ 23951945 (+) |
| G1964309 | LOC106610942 | non-coding | upstream | 189931 | 23804484 ~ 23805220 (+) |
| G1964467 | NA | non-coding | downstream | 24372 | 24019927 ~ 24020152 (+) |
| G1964468 | NA | non-coding | downstream | 24686 | 24020241 ~ 24020560 (+) |
| G1964489 | LOC106610933 | non-coding | downstream | 55041 | 24050596 ~ 24068616 (+) |
| G1964501 | NA | non-coding | downstream | 91711 | 24087266 ~ 24087467 (+) |
| G1965150 | NA | non-coding | downstream | 201436 | 24196991 ~ 24197208 (+) |
| G1964177 | NA | other | upstream | 381386 | 23605934 ~ 23613765 (+) |
| G1963734 | NA | other | upstream | 1076465 | 22917946 ~ 22918686 (+) |
| G1962949 | NA | other | upstream | 1602195 | 22392591 ~ 22392956 (+) |
| lrrc9 | LOC106610979 | other | upstream | 1684350 | 22297012 ~ 22318009 (+) |
| G1962880 | rtn1 | other | upstream | 1720488 | 22250058 ~ 22274663 (+) |
| G1964499 | NA | other | downstream | 80966 | 24076521 ~ 24076721 (+) |
| G1965262 | NA | other | downstream | 364882 | 24360437 ~ 24360985 (+) |
| G1965263 | NA | other | downstream | 365533 | 24361088 ~ 24361482 (+) |
| G1965396 | NA | other | downstream | 570176 | 24565731 ~ 24567147 (+) |
| LOC110505697 | ypel5 | other | downstream | 793572 | 24788926 ~ 24791594 (+) |
