G1964467


Basic Information

Item Value
gene id G1964467
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 24019927 ~ 24020152 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2246165
gttaggtggttaactgatttttgtcctctgacgtccttgggtaggcagagggagtctggaagggcatcaaggaatctttgtgttgtctgtgaatttatagcacaacttttgatgctccttggttggggtctgagcagattatttgttgcaattgtaaacgtaataaaatggtggtccaatagtccagaattatgaggaaaaacattaagatccacaacatttattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2246165 True 226 lncRNA 0.40 1 24019927 24020152

Neighbor

gene id symbol gene type direction distance location
LOC110505665 ampm1 coding upstream 28465 23972896 ~ 23991462 (+)
LOC110504213 NA coding upstream 258624 23756983 ~ 23761303 (+)
LOC110505657 cdc5l coding upstream 273601 23737748 ~ 23746326 (+)
napba LOC106610947 coding upstream 294258 23718491 ~ 23725669 (+)
hao1 hao1 coding upstream 312576 23704664 ~ 23707351 (+)
enpep LOC106610934 coding downstream 12730 24032882 ~ 24058913 (+)
LOC110505673 NA coding downstream 58569 24078721 ~ 24080745 (+)
LOC110505676 LOC106610929 coding downstream 215126 24235278 ~ 24289662 (+)
LOC110505678 LOC106611137 coding downstream 293322 24313474 ~ 24355303 (+)
zgc:123321 yipf5 coding downstream 355675 24375827 ~ 24378263 (+)
G1964445 NA non-coding upstream 24372 23995151 ~ 23995555 (+)
G1964443 NA non-coding upstream 25674 23994005 ~ 23994253 (+)
G1964442 NA non-coding upstream 26324 23993329 ~ 23993603 (+)
G1964385 NA non-coding upstream 56259 23892004 ~ 23963668 (+)
G1964377 NA non-coding upstream 67982 23883282 ~ 23951945 (+)
G1964468 NA non-coding downstream 89 24020241 ~ 24020560 (+)
G1964489 LOC106610933 non-coding downstream 30444 24050596 ~ 24068616 (+)
G1964501 NA non-coding downstream 67114 24087266 ~ 24087467 (+)
G1965150 NA non-coding downstream 176839 24196991 ~ 24197208 (+)
G1965154 NA non-coding downstream 179163 24199315 ~ 24199618 (+)
G1964177 NA other upstream 406162 23605934 ~ 23613765 (+)
G1963734 NA other upstream 1101241 22917946 ~ 22918686 (+)
G1962949 NA other upstream 1626971 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 1709126 22297012 ~ 22318009 (+)
G1962880 rtn1 other upstream 1745264 22250058 ~ 22274663 (+)
G1964499 NA other downstream 56369 24076521 ~ 24076721 (+)
G1965262 NA other downstream 340285 24360437 ~ 24360985 (+)
G1965263 NA other downstream 340936 24361088 ~ 24361482 (+)
G1965396 NA other downstream 545579 24565731 ~ 24567147 (+)
LOC110505697 ypel5 other downstream 768975 24788926 ~ 24791594 (+)

Expression


Co-expression Network