G1964501


Basic Information

Item Value
gene id G1964501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 24087266 ~ 24087467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2246200
gttcattaactttttattactccttgtccgtgtcacacaatcccttcttatgaactcatattgtcaGTCACTTATAAAACAAAGTATAAGTTTACCTAGTTACAATTCTATTTAAAATGGGGATATTGTTTATTCATTTATCCATAATAAATTCAACAGTTACGTTACATCCtcattttaaaattgattaaacatgTTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2246200 True 202 lncRNA 0.27 1 24087266 24087467

Neighbor

gene id symbol gene type direction distance location
LOC110505673 NA coding upstream 6521 24078721 ~ 24080745 (+)
enpep LOC106610934 coding upstream 28353 24032882 ~ 24058913 (+)
LOC110505665 ampm1 coding upstream 95804 23972896 ~ 23991462 (+)
LOC110504213 NA coding upstream 325963 23756983 ~ 23761303 (+)
LOC110505657 cdc5l coding upstream 340940 23737748 ~ 23746326 (+)
LOC110505676 LOC106610929 coding downstream 147811 24235278 ~ 24289662 (+)
LOC110505678 LOC106611137 coding downstream 226007 24313474 ~ 24355303 (+)
zgc:123321 yipf5 coding downstream 288360 24375827 ~ 24378263 (+)
utp25 diexf coding downstream 297672 24385139 ~ 24391050 (+)
LOC110505684 LOC106611134 coding downstream 360146 24447613 ~ 24449656 (+)
G1964489 LOC106610933 non-coding upstream 18650 24050596 ~ 24068616 (+)
G1964468 NA non-coding upstream 66706 24020241 ~ 24020560 (+)
G1964467 NA non-coding upstream 67114 24019927 ~ 24020152 (+)
G1964445 NA non-coding upstream 91711 23995151 ~ 23995555 (+)
G1964443 NA non-coding upstream 93013 23994005 ~ 23994253 (+)
G1965150 NA non-coding downstream 109524 24196991 ~ 24197208 (+)
G1965154 NA non-coding downstream 111848 24199315 ~ 24199618 (+)
G1965160 NA non-coding downstream 115819 24203286 ~ 24203490 (+)
G1965169 NA non-coding downstream 121496 24208963 ~ 24209294 (+)
G1965173 NA non-coding downstream 125462 24212929 ~ 24213137 (+)
G1964499 NA other upstream 10545 24076521 ~ 24076721 (+)
G1964177 NA other upstream 473501 23605934 ~ 23613765 (+)
G1963734 NA other upstream 1168580 22917946 ~ 22918686 (+)
G1962949 NA other upstream 1694310 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 1776465 22297012 ~ 22318009 (+)
G1965262 NA other downstream 272970 24360437 ~ 24360985 (+)
G1965263 NA other downstream 273621 24361088 ~ 24361482 (+)
G1965396 NA other downstream 478264 24565731 ~ 24567147 (+)
LOC110505697 ypel5 other downstream 701660 24788926 ~ 24791594 (+)
G1967032 NA other downstream 1744109 25831576 ~ 25833321 (+)

Expression


Co-expression Network