G1965160


Basic Information

Item Value
gene id G1965160
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 24203286 ~ 24203490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2246927
gcgcccggcctgccacaggagtcgctggtgcgcgatgagacaaggagatccctaccgaccaatccctccctaacccggacgacgctaggccaattgtgcgtcgccccacggacctcccggtcgcggcctgtTACGACacagcctgggcgcgaacccagggactctgatggcacagctggcgctgcagtacagcgcccttaaccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2246927 True 205 lncRNA 0.66 1 24203286 24203490

Neighbor

gene id symbol gene type direction distance location
LOC110505673 NA coding upstream 122541 24078721 ~ 24080745 (+)
enpep LOC106610934 coding upstream 144373 24032882 ~ 24058913 (+)
LOC110505665 ampm1 coding upstream 211824 23972896 ~ 23991462 (+)
LOC110504213 NA coding upstream 441983 23756983 ~ 23761303 (+)
LOC110505657 cdc5l coding upstream 456960 23737748 ~ 23746326 (+)
LOC110505676 LOC106610929 coding downstream 31788 24235278 ~ 24289662 (+)
LOC110505678 LOC106611137 coding downstream 109984 24313474 ~ 24355303 (+)
zgc:123321 yipf5 coding downstream 172337 24375827 ~ 24378263 (+)
utp25 diexf coding downstream 181649 24385139 ~ 24391050 (+)
LOC110505684 LOC106611134 coding downstream 244123 24447613 ~ 24449656 (+)
G1965154 NA non-coding upstream 3668 24199315 ~ 24199618 (+)
G1965150 NA non-coding upstream 6078 24196991 ~ 24197208 (+)
G1964501 NA non-coding upstream 115819 24087266 ~ 24087467 (+)
G1964489 LOC106610933 non-coding upstream 134670 24050596 ~ 24068616 (+)
G1964468 NA non-coding upstream 182726 24020241 ~ 24020560 (+)
G1965169 NA non-coding downstream 5473 24208963 ~ 24209294 (+)
G1965173 NA non-coding downstream 9439 24212929 ~ 24213137 (+)
G1965207 NA non-coding downstream 42144 24245634 ~ 24247349 (+)
G1965236 NA non-coding downstream 79458 24282948 ~ 24283509 (+)
G1965239 NA non-coding downstream 94474 24297964 ~ 24299706 (+)
G1964499 NA other upstream 126565 24076521 ~ 24076721 (+)
G1964177 NA other upstream 589521 23605934 ~ 23613765 (+)
G1963734 NA other upstream 1284600 22917946 ~ 22918686 (+)
G1962949 NA other upstream 1810330 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 1892485 22297012 ~ 22318009 (+)
G1965262 NA other downstream 156947 24360437 ~ 24360985 (+)
G1965263 NA other downstream 157598 24361088 ~ 24361482 (+)
G1965396 NA other downstream 362241 24565731 ~ 24567147 (+)
LOC110505697 ypel5 other downstream 585637 24788926 ~ 24791594 (+)
G1967032 NA other downstream 1628086 25831576 ~ 25833321 (+)

Expression


Co-expression Network