G1965236


Basic Information

Item Value
gene id G1965236
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 24282948 ~ 24283509 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2247009
agggaactttatgcacttggccagatgattctgtaTCTCTGTGggattcttcacatatgatttggcacagtatttgcaaatgtacacagcttttccttctacattagctgcagtgaaatgtctccacacaacAGATAGTGcttgtggcattttcctgtaaagatttgaaaaatttttgaaaaaataaaatatacaattCAATGTACAGATAGttagttagattaaacaactcctttgtaagatacatgttttaaaatggaACATGTATGGAATTAACACCTCAATTAGCAGGCAAGCTAAAAACCCagatggtagcaaaaactaactagcggAAATtgtagcggcagggtagcctagtggttagagcgttggacaagtaacctgaaggttgcgagttcaaacccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgtcattgaaaataagaattagttcttaactgacttgcctagttaaataaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2247009 True 511 lncRNA 0.38 2 24282948 24283509

Neighbor

gene id symbol gene type direction distance location
LOC110505673 NA coding upstream 202203 24078721 ~ 24080745 (+)
enpep LOC106610934 coding upstream 224035 24032882 ~ 24058913 (+)
LOC110505665 ampm1 coding upstream 291486 23972896 ~ 23991462 (+)
LOC110504213 NA coding upstream 521645 23756983 ~ 23761303 (+)
LOC110505657 cdc5l coding upstream 536622 23737748 ~ 23746326 (+)
LOC110505678 LOC106611137 coding downstream 29965 24313474 ~ 24355303 (+)
zgc:123321 yipf5 coding downstream 92318 24375827 ~ 24378263 (+)
utp25 diexf coding downstream 101630 24385139 ~ 24391050 (+)
LOC110505684 LOC106611134 coding downstream 164104 24447613 ~ 24449656 (+)
slc66a3 pqlc3 coding downstream 220763 24504272 ~ 24507841 (+)
G1965207 NA non-coding upstream 35599 24245634 ~ 24247349 (+)
G1965173 NA non-coding upstream 69811 24212929 ~ 24213137 (+)
G1965169 NA non-coding upstream 73654 24208963 ~ 24209294 (+)
G1965160 NA non-coding upstream 79458 24203286 ~ 24203490 (+)
G1965154 NA non-coding upstream 83330 24199315 ~ 24199618 (+)
G1965239 NA non-coding downstream 14455 24297964 ~ 24299706 (+)
G1965255 NA non-coding downstream 55633 24339142 ~ 24339506 (+)
G1965264 NA non-coding downstream 78184 24361693 ~ 24362029 (+)
G1965265 NA non-coding downstream 79581 24363090 ~ 24363296 (+)
G1965266 NA non-coding downstream 79821 24363330 ~ 24363556 (+)
G1964499 NA other upstream 206227 24076521 ~ 24076721 (+)
G1964177 NA other upstream 669183 23605934 ~ 23613765 (+)
G1963734 NA other upstream 1364262 22917946 ~ 22918686 (+)
G1962949 NA other upstream 1889992 22392591 ~ 22392956 (+)
lrrc9 LOC106610979 other upstream 1972147 22297012 ~ 22318009 (+)
G1965262 NA other downstream 76928 24360437 ~ 24360985 (+)
G1965263 NA other downstream 77579 24361088 ~ 24361482 (+)
G1965396 NA other downstream 282222 24565731 ~ 24567147 (+)
LOC110505697 ypel5 other downstream 505618 24788926 ~ 24791594 (+)
G1967032 NA other downstream 1548067 25831576 ~ 25833321 (+)

Expression


Co-expression Network