G1965330


Basic Information

Item Value
gene id G1965330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 24473776 ~ 24474075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2247127
gttatatccttcctgtttggccctgtccgggggtgtcctcggatggggccacagtgtctcctgacccctcctgtctcagcctccagtatttatgctgcagtagtttatgtgtcgggagggctagggtcagtttgttatatctggagtacttctcctgtcctattcggtgtcctgtgtgaatctaagtgtgcgttctctaattctctccttctctctttctttctctcggaggacctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2247127 True 300 lncRNA 0.53 1 24473776 24474075

Neighbor

gene id symbol gene type direction distance location
LOC110505684 LOC106611134 coding upstream 24120 24447613 ~ 24449656 (+)
utp25 diexf coding upstream 82726 24385139 ~ 24391050 (+)
zgc:123321 yipf5 coding upstream 95513 24375827 ~ 24378263 (+)
LOC110505678 LOC106611137 coding upstream 118473 24313474 ~ 24355303 (+)
LOC110505676 LOC106610929 coding upstream 184114 24235278 ~ 24289662 (+)
slc66a3 pqlc3 coding downstream 30197 24504272 ~ 24507841 (+)
LOC110505689 pdss2 coding downstream 121511 24595586 ~ 24617110 (+)
LOC110505690 LOC106611127 coding downstream 152543 24626618 ~ 24631359 (+)
LOC110505692 gdf7 coding downstream 168973 24643048 ~ 24648427 (+)
hs1bp3 hs1bp3 coding downstream 297739 24771814 ~ 24775421 (+)
G1965326 NA non-coding upstream 8344 24465135 ~ 24465432 (+)
G1965319 NA non-coding upstream 15510 24458031 ~ 24458266 (+)
G1965315 NA non-coding upstream 21763 24451046 ~ 24452013 (+)
G1965304 NA non-coding upstream 39674 24433853 ~ 24434102 (+)
G1965300 NA non-coding upstream 43910 24429476 ~ 24429866 (+)
G1965333 NA non-coding downstream 3052 24477127 ~ 24477515 (+)
G1965334 NA non-coding downstream 3812 24477887 ~ 24478165 (+)
G1965337 NA non-coding downstream 6052 24480127 ~ 24480349 (+)
G1965340 NA non-coding downstream 8654 24482729 ~ 24483948 (+)
G1965341 NA non-coding downstream 10009 24484084 ~ 24484593 (+)
G1965263 NA other upstream 112294 24361088 ~ 24361482 (+)
G1965262 NA other upstream 112791 24360437 ~ 24360985 (+)
G1964499 NA other upstream 397055 24076521 ~ 24076721 (+)
G1964177 NA other upstream 860011 23605934 ~ 23613765 (+)
G1963734 NA other upstream 1555090 22917946 ~ 22918686 (+)
G1965396 NA other downstream 91656 24565731 ~ 24567147 (+)
LOC110505697 ypel5 other downstream 315052 24788926 ~ 24791594 (+)
G1967032 NA other downstream 1357501 25831576 ~ 25833321 (+)
G1967965 NA other downstream 2180830 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 2514764 26988390 ~ 27099710 (+)

Expression


Co-expression Network