G1965402


Basic Information

Item Value
gene id G1965402
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 24574890 ~ 24575169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2247202
GCCatgcaattttttgttgttggaaAAACTGGAGGGTTTGTTGTTGTGGCCAACCTTGTGGGTGCATGAAAAAAGAAACATGTGGATATCACTTACACAAATGGCCTGCATGAATGTGAGAGTGTGAGACGTAATATAGAATCTGCACCTCCTCAGCAGACAAGGACTTTCTGTGCTCTAGCCATGTCTGTTTTCCTAATGTGGGAATTCTTGTCCTTGGATAACACTTGACTTTGTTCCTTACTCACTGAAATACAATATCTCTTCTGTTGTGCTTTTg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2247202 True 280 lncRNA 0.41 1 24574890 24575169

Neighbor

gene id symbol gene type direction distance location
slc66a3 pqlc3 coding upstream 67049 24504272 ~ 24507841 (+)
LOC110505684 LOC106611134 coding upstream 125234 24447613 ~ 24449656 (+)
utp25 diexf coding upstream 183840 24385139 ~ 24391050 (+)
zgc:123321 yipf5 coding upstream 196627 24375827 ~ 24378263 (+)
LOC110505678 LOC106611137 coding upstream 219587 24313474 ~ 24355303 (+)
LOC110505689 pdss2 coding downstream 20417 24595586 ~ 24617110 (+)
LOC110505690 LOC106611127 coding downstream 51449 24626618 ~ 24631359 (+)
LOC110505692 gdf7 coding downstream 67879 24643048 ~ 24648427 (+)
hs1bp3 hs1bp3 coding downstream 196645 24771814 ~ 24775421 (+)
LOC110505697 ypel5 coding downstream 213757 24788926 ~ 24791594 (+)
G1965401 NA non-coding upstream 909 24573662 ~ 24573981 (+)
G1965399 NA non-coding upstream 3819 24570859 ~ 24571071 (+)
G1965394 NA non-coding upstream 9686 24562756 ~ 24565204 (+)
G1965341 NA non-coding upstream 90297 24484084 ~ 24484593 (+)
G1965340 NA non-coding upstream 90942 24482729 ~ 24483948 (+)
G1965693 NA non-coding downstream 59525 24634694 ~ 24635019 (+)
G1965696 LOC106611126 non-coding downstream 62618 24637787 ~ 24638111 (+)
G1965703 NA non-coding downstream 74796 24649965 ~ 24650280 (+)
G1965709 NA non-coding downstream 83146 24658315 ~ 24658530 (+)
G1965396 NA other upstream 7743 24565731 ~ 24567147 (+)
G1965263 NA other upstream 213408 24361088 ~ 24361482 (+)
G1965262 NA other upstream 213905 24360437 ~ 24360985 (+)
G1964499 NA other upstream 498169 24076521 ~ 24076721 (+)
G1964177 NA other upstream 961125 23605934 ~ 23613765 (+)
G1967032 NA other downstream 1256407 25831576 ~ 25833321 (+)
G1967965 NA other downstream 2079736 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 2413670 26988390 ~ 27099710 (+)
G1970001 NA other downstream 3838431 28413600 ~ 28413919 (+)

Expression


Co-expression Network