Gene
RNA
| Item | Value |
|---|---|
| gene id | G1966025 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 24932494 ~ 24932786 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2247885 | True | 293 | lncRNA | 0.39 | 1 | 24932494 | 24932786 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505697 | ypel5 | coding | upstream | 140900 | 24788926 ~ 24791594 (+) |
| hs1bp3 | hs1bp3 | coding | upstream | 157073 | 24771814 ~ 24775421 (+) |
| LOC110505692 | gdf7 | coding | upstream | 284067 | 24643048 ~ 24648427 (+) |
| LOC110505690 | LOC106611127 | coding | upstream | 301135 | 24626618 ~ 24631359 (+) |
| LOC110505689 | pdss2 | coding | upstream | 315384 | 24595586 ~ 24617110 (+) |
| LOC110504214 | LOC106601609 | coding | downstream | 112076 | 25044862 ~ 25111937 (+) |
| LOC110504215 | LOC106611119 | coding | downstream | 185373 | 25118159 ~ 25185867 (+) |
| LOC110505701 | LOC106611118 | coding | downstream | 289212 | 25221998 ~ 25329784 (+) |
| LOC110505705 | vdac2 | coding | downstream | 643176 | 25575962 ~ 25576971 (+) |
| LOC110504216 | NA | coding | downstream | 1066915 | 25999701 ~ 26089364 (+) |
| G1966024 | NA | non-coding | upstream | 120 | 24932128 ~ 24932374 (+) |
| G1966020 | NA | non-coding | upstream | 3621 | 24928658 ~ 24928873 (+) |
| G1965998 | NA | non-coding | upstream | 20854 | 24911308 ~ 24911640 (+) |
| G1965971 | NA | non-coding | upstream | 43725 | 24888490 ~ 24888769 (+) |
| G1965966 | NA | non-coding | upstream | 47266 | 24885013 ~ 24885228 (+) |
| G1966065 | NA | non-coding | downstream | 63210 | 24995996 ~ 24996265 (+) |
| G1966120 | NA | non-coding | downstream | 116298 | 25049084 ~ 25049290 (+) |
| G1966174 | NA | non-coding | downstream | 160832 | 25093618 ~ 25093908 (+) |
| G1966618 | NA | non-coding | downstream | 526905 | 25459691 ~ 25460030 (+) |
| G1965396 | NA | other | upstream | 365347 | 24565731 ~ 24567147 (+) |
| G1965263 | NA | other | upstream | 571012 | 24361088 ~ 24361482 (+) |
| G1965262 | NA | other | upstream | 571509 | 24360437 ~ 24360985 (+) |
| G1964499 | NA | other | upstream | 855773 | 24076521 ~ 24076721 (+) |
| G1967032 | NA | other | downstream | 898790 | 25831576 ~ 25833321 (+) |
| G1967965 | NA | other | downstream | 1722119 | 26654905 ~ 26655336 (+) |
| LOC110505721 | ccdc88c | other | downstream | 2056053 | 26988390 ~ 27099710 (+) |
| G1970001 | NA | other | downstream | 3480814 | 28413600 ~ 28413919 (+) |
| G1971104 | NA | other | downstream | 4541334 | 29474120 ~ 29478383 (+) |
