G1966065


Basic Information

Item Value
gene id G1966065
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 24995996 ~ 24996265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2247928
ggccccgcagccttgtgtatgttgacctgtttaaaggtcttactcacgtcagctatggagagcgtgatcacacagtcgtccggaacagctgatgctctcatgcatgcttcagtgttgcttgcctcgaagcgagcatagaagtgatttagctcgtctggtatgctcgtgtcactgagcagctcgcggctgtgcttccctttgtagtctgtaatagtttgccagccctgccacatccgacgagcgtcggagccggtgtagtatgattaaatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2247928 True 270 lncRNA 0.53 1 24995996 24996265

Neighbor

gene id symbol gene type direction distance location
LOC110505697 ypel5 coding upstream 204402 24788926 ~ 24791594 (+)
hs1bp3 hs1bp3 coding upstream 220575 24771814 ~ 24775421 (+)
LOC110505692 gdf7 coding upstream 347569 24643048 ~ 24648427 (+)
LOC110505690 LOC106611127 coding upstream 364637 24626618 ~ 24631359 (+)
LOC110505689 pdss2 coding upstream 378886 24595586 ~ 24617110 (+)
LOC110504214 LOC106601609 coding downstream 48597 25044862 ~ 25111937 (+)
LOC110504215 LOC106611119 coding downstream 121894 25118159 ~ 25185867 (+)
LOC110505701 LOC106611118 coding downstream 225733 25221998 ~ 25329784 (+)
LOC110505705 vdac2 coding downstream 579697 25575962 ~ 25576971 (+)
LOC110504216 NA coding downstream 1003436 25999701 ~ 26089364 (+)
G1966025 NA non-coding upstream 63210 24932494 ~ 24932786 (+)
G1966024 NA non-coding upstream 63622 24932128 ~ 24932374 (+)
G1966020 NA non-coding upstream 67123 24928658 ~ 24928873 (+)
G1965998 NA non-coding upstream 84356 24911308 ~ 24911640 (+)
G1965971 NA non-coding upstream 107227 24888490 ~ 24888769 (+)
G1966120 NA non-coding downstream 52819 25049084 ~ 25049290 (+)
G1966174 NA non-coding downstream 97353 25093618 ~ 25093908 (+)
G1966618 NA non-coding downstream 463426 25459691 ~ 25460030 (+)
G1966635 NA non-coding downstream 474210 25470475 ~ 25470693 (+)
G1965396 NA other upstream 428849 24565731 ~ 24567147 (+)
G1965263 NA other upstream 634514 24361088 ~ 24361482 (+)
G1965262 NA other upstream 635011 24360437 ~ 24360985 (+)
G1964499 NA other upstream 919275 24076521 ~ 24076721 (+)
G1967032 NA other downstream 835311 25831576 ~ 25833321 (+)
G1967965 NA other downstream 1658640 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 1992574 26988390 ~ 27099710 (+)
G1970001 NA other downstream 3417335 28413600 ~ 28413919 (+)
G1971104 NA other downstream 4477855 29474120 ~ 29478383 (+)

Expression


Co-expression Network