Gene
RNA
| Item | Value |
|---|---|
| gene id | G1966635 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 25470475 ~ 25470693 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2248525 | True | 219 | lncRNA | 0.43 | 1 | 25470475 | 25470693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505701 | LOC106611118 | coding | upstream | 140691 | 25221998 ~ 25329784 (+) |
| LOC110504215 | LOC106611119 | coding | upstream | 284608 | 25118159 ~ 25185867 (+) |
| LOC110504214 | LOC106601609 | coding | upstream | 358538 | 25044862 ~ 25111937 (+) |
| LOC110505697 | ypel5 | coding | upstream | 678881 | 24788926 ~ 24791594 (+) |
| hs1bp3 | hs1bp3 | coding | upstream | 695054 | 24771814 ~ 24775421 (+) |
| LOC110505705 | vdac2 | coding | downstream | 105269 | 25575962 ~ 25576971 (+) |
| LOC110504216 | NA | coding | downstream | 529008 | 25999701 ~ 26089364 (+) |
| LOC110505710 | spred1 | coding | downstream | 966422 | 26437115 ~ 26520383 (+) |
| LOC110505712 | LOC106611156 | coding | downstream | 1056957 | 26527650 ~ 26534059 (+) |
| LOC110504217 | LOC106601399 | coding | downstream | 1112166 | 26582859 ~ 26623165 (+) |
| G1966618 | NA | non-coding | upstream | 10445 | 25459691 ~ 25460030 (+) |
| G1966174 | NA | non-coding | upstream | 376567 | 25093618 ~ 25093908 (+) |
| G1966120 | NA | non-coding | upstream | 421185 | 25049084 ~ 25049290 (+) |
| G1966065 | NA | non-coding | upstream | 474210 | 24995996 ~ 24996265 (+) |
| G1966693 | NA | non-coding | downstream | 44140 | 25514833 ~ 25515061 (+) |
| G1966742 | NA | non-coding | downstream | 123358 | 25594051 ~ 25678575 (+) |
| G1966865 | NA | non-coding | downstream | 209710 | 25680403 ~ 25680612 (+) |
| G1966876 | NA | non-coding | downstream | 219784 | 25690477 ~ 25690867 (+) |
| G1966882 | NA | non-coding | downstream | 224355 | 25695048 ~ 25695269 (+) |
| G1965396 | NA | other | upstream | 903328 | 24565731 ~ 24567147 (+) |
| G1965263 | NA | other | upstream | 1108993 | 24361088 ~ 24361482 (+) |
| G1965262 | NA | other | upstream | 1109490 | 24360437 ~ 24360985 (+) |
| G1964499 | NA | other | upstream | 1393754 | 24076521 ~ 24076721 (+) |
| G1967032 | NA | other | downstream | 360883 | 25831576 ~ 25833321 (+) |
| G1967965 | NA | other | downstream | 1184212 | 26654905 ~ 26655336 (+) |
| LOC110505721 | ccdc88c | other | downstream | 1518146 | 26988390 ~ 27099710 (+) |
| G1970001 | NA | other | downstream | 2942907 | 28413600 ~ 28413919 (+) |
| G1971104 | NA | other | downstream | 4003427 | 29474120 ~ 29478383 (+) |
